Gasterosteus aculeatus (three-spined stickleback): 120825978
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Entry
120825978 CDS
T07457
Name
(RefSeq) antigen peptide transporter 2-like isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat02010
ABC transporters
gat04145
Phagosome
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120825978
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120825978
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120825978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120825978
Enzymes [BR:
gat01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
120825978
Transporters [BR:
gat02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
120825978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_30
AAA_15
AAA_16
AAA_29
Motif
Other DBs
NCBI-GeneID:
120825978
NCBI-ProteinID:
XP_040043806
LinkDB
All DBs
Position
X:1057864..1063490
Genome browser
AA seq
742 aa
AA seq
DB search
MKVKVDQTSDCIDTEGYADDCSCMTTADMAKVTRKGIALVSAVCVDLSLFYAAGLVATRS
VFGHFARLWLHAALRCSALSAVTLLTLGDLNPLLIRVIASHSLLPAVFETGTKALYREET
ECGPSADARCWLVCAAASLVGALFWEITVPDADAAAGKEKKQKARVLFLRVLALYKPEYL
LLLGGLLMLTLAVLCEMFIPFYTGRVIDILGTQYRPNEFVSALLFMGLYSLGSSFSAGCR
GGFLMCAISAFTCRIKVQLFGALTRQEIGFFETTKTGEITSRLSKDTTLMGRAVCLNVNV
LLRTFIKTLGMISLMMNLSWKLTFLVLMEVPITSLIQNIYDTHYQRLSLAVHDSMALANE
VVNEVVSSIHVLRSFNTEKHEARRYDDRLMDTHILKTRQNAVRAVYLLARRLTGLGMQVV
MMYYGRLFIRSGQMTTGNLVSFILYQSDLGDNIRTLTYIFGDMLNSVGAAGKVFEYLDRK
AQVSMEGKLKPDQLTGNVVFRNLSFAYPTYPDKTVLQDFSLELKSGQMTALVGTSGKGKS
TCVSLLQRFYEQQDGEILLDNEPLKSYDHRFLHKKIALVSQEPVLFSGSIRDNIAYGLAE
CSLDEIQEAARKANAHDFIMKLEKGYDAEVGEGGGQLSKSQRQQIAIARALVRQPQVLIL
DEITSSLDMTSENKIHQALASCPNQTLLVIAHKLRTIQRADQIVVIDGGRVQERGTHQEL
MELKGSYYRLREELFEEENPAQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaaagtggaccaaacctcagactgcatcgacacagaaggttatgcagacgac
tgtagctgcatgacgacagccgatatggcaaaagtaacccgcaaaggcatcgctttggtg
tccgcagtctgcgtggacctgtccttgttttacgcagcgggactggtggcgactcgcagc
gtgtttggacactttgcgcgtctctggctccacgcggctctccgctgctcggcactgagc
gccgtgactctgctcaccctcggagatctcaacccgttgctgatccgcgttatcgcgtcg
cacagtcttctgcccgcggtgtttgagaccggaaccaaagcgctctaccgcgaggagacc
gaatgcggcccgtcggcggatgcgcgctgctggctcgtttgcgccgcagcgtcgctggtc
ggtgcgctgttttgggaaatcaccgtgccggacgcggatgctgccgccggtaaagagaag
aaacagaaggccagagtgctgtttttgagagtcctggccttgtacaaacccgaatatctg
ctgctccttggggggctgctgatgctgacgctggcagttttgtgtgagatgttcatcccg
ttctacactggcagagtcatcgacatccttggcactcagtatcggcccaatgaatttgta
tctgcgcttcttttcatgggactatactctctgggcagctcttttagtgcaggctgcaga
ggaggtttcttaatgtgcgccatcagcgccttcacgtgcagaattaaagtccagctgttt
ggggctttgaccagacaggagattgggttctttgagacaacaaagacaggggaaatcaca
tcaaggttgtctaaagacaccaccctgatgggaagagcggtgtgtctcaatgtcaacgtg
ctgctgaggacgttcatcaagacgctgggcatgatctccctgatgatgaatctttcctgg
aagctcacattcctggtattgatggaggtgcccatcaccagcctcattcagaacatctat
gacacacactaccagcggctgtccctggcagtgcacgactccatggctctggcaaatgaa
gtcgtgaacgaggtggtgtccagtattcatgtgctacgtagcttcaacacagagaaacac
gaagcccgtcgttatgacgaccgcttgatggacacacacatcctgaagacgcgccagaac
gctgtcagagctgtttaccttctcgcacgcaggttgacaggcttaggcatgcaggtggtc
atgatgtactacggcaggctgttcatccggagtggacagatgaccactggaaacctggtt
tccttcatcctctaccagtcagatcttggagacaacatcaggacactgacctacatcttt
ggcgacatgctgaactcggtgggggctgctgggaaagtgtttgagtacctggaccgtaaa
gctcaggtcagcatggaggggaaactcaaaccggatcagctgacagggaacgtcgtcttc
cgcaatctcagcttcgcctatcctacttaccccgacaaaacagtactgcaggacttttca
ttggagctgaagtcaggtcagatgacagcgctggtgggaacatctggaaaagggaaaagc
acatgtgtgagtctgctgcagcgcttctatgagcagcaggacggagaaatcctattggac
aacgaaccactgaaatcctatgaccaccgtttcctccacaagaagattgctttggtgagc
caggagcctgtcctcttctctggctccatcagagacaacatcgcctacgggctcgctgaa
tgctcattggatgagatccaggaagcagcacgcaaagccaacgcacacgacttcatcatg
aagctggagaagggctacgatgcagaggtgggtgagggtgggggccaactatctaagagc
cagaggcagcagatcgccatcgctcgagctctggtcaggcagccacaggtcctcattctg
gatgaaataaccagctctctggacatgaccagtgaaaacaagattcaccaggctttggcc
agttgtcctaaccagaccctgctggtgatcgcccacaagctgaggaccatccagagggcc
gatcagattgttgtgatcgatggcggcagagttcaggagcgagggactcaccaggaactg
atggagttgaaggggagctactaccgactgagggaggagctctttgaagaggaaaatcca
gcacagtga
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