Gasterosteus aculeatus (three-spined stickleback): 120826368
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Entry
120826368 CDS
T07457
Symbol
abcf1
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gat03012
]
120826368 (abcf1)
Translation factors [BR:
gat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120826368 (abcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_18
AAA_22
AAA_28
NACHT
AAA_14
AAA_16
AAA
RsgA_GTPase
AAA_24
AAA_5
AAA_25
ABC_tran_Xtn
MMR_HSR1
cobW
NB-ARC
ATP-synt_ab
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
120826368
NCBI-ProteinID:
XP_040044509
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All DBs
Position
X:complement(3419..17306)
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AA seq
787 aa
AA seq
DB search
MPKSMQEEAVWVDEEAAPPAAEKTTVKKGKKDKKKKKSFFEELGTDVKPKADEAAVRETA
GKQSHKKKKDVRKGKGGDAGGDDDEDVMLKLKKLSMQASDEDDEPATAGRKGSKKKQGGN
IFAALSQSDEDEARPVDEEDTPAKRSGKPAVRPHSKDEDEEEEDASDGGDTMMSAEDVIA
EQADGQESDPLANLSKKDKKKKKKRMEYERQVASVRAQNALEGDFSISQAEMSSRQAMLE
NASDIKLERFSISAHGKELFINADLLIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPN
IDVLLCEQEVVADDTPAVQAVLKADTRRLKLLEEERQLQVRLEKGEDSVAERLEKVYEEL
RAIGAAAAEPKARRILAGLSFTPEMQNRPTKRFSGGWRMRVSLARALFMEPTLLMLDEPT
NHLDLNAVIWLNNYLQGWKKTLLIVSHDQSFLDDVCTDIIHLDNEKLYYYRGNYLTFKKM
YVQKQKELQKQYDKQEKKLKDLKAGGKSTKQAEKQTKVDLTRKQQKGKKKGAQEEESQDA
TELLKRPREYTVKFTFPNPPPLSPPILGLHCVDFGYTAQKPLFKNVDFGIDMDSRICIVG
PNGVGKSTLLLLLTGKLSPSKGEMRRNHRLKVGFFNQQYADQLNMEETATEYLMRNFNLP
YQDGRKCLGRFGLESHAHTIQISKLSGGQKARVVFAELSCRQPDVLILDEPTNNLDIESI
DALSEAINEYKGAVIIVSHDARLITETQCTMWVVEDSTVNQIDGDFDDYKREVLESLGET
MVNKVNP
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtcaatgcaggaagaagcggtgtgggtggacgaggaggcggccccgccagcc
gcagaaaagacgaccgtgaaaaagggcaagaaagataagaagaagaagaagagtttcttt
gaggaacttggcacagatgtcaaacctaaagcagatgaggctgctgtgagagagaccgca
gggaaacagtctcataaaaagaaaaaagacgtgcggaaaggcaagggtggagacgcaggt
ggggacgacgatgaggacgtcatgctgaagctgaaaaagctttcaatgcaagcaagtgat
gaggacgacgagccagccacagccggcaggaaagggagcaagaagaagcagggcggaaac
atctttgctgctctgagccagagtgatgaggatgaggcacgcccagtggatgaagaagat
acaccagcaaaaaggagcgggaaaccggctgtacgaccacacagtaaggacgaagatgag
gaggaggaggatgccagtgacggaggtgacacgatgatgagcgctgaggacgtcatcgca
gagcaggccgacgggcaggagagcgacccgctggccaacctcagcaagaaggacaagaag
aagaaaaagaaacggatggagtatgagcggcaggtggccagtgtccgtgctcagaacgcc
ttggagggagatttctccatctcccaggcagagatgtcctccagacaggccatgctggag
aacgcctcggacatcaagctggagaggttcagcatctccgctcatgggaaagagctgttc
atcaacgctgaccttctcattgtggcgggaagaagatatggtttggttggacccaatggc
aaaggaaagaccaccttactgaagcacatagccaaccgagctctgagcatcccccccaac
atcgatgtgctgctgtgtgagcaggaggtggtagctgatgacaccccggcggtgcaggcg
gtgctgaaggcagacacccgccgcctgaagctcctggaggaggagcggcagctgcaggtg
cgcctggagaagggagaggacagcgtggcggagcggctggagaaggtctatgaagaactc
cgggctattggagctgcagccgccgagcccaaggcccggaggatcctggccggtctctcc
ttcacccctgagatgcagaacagacccaccaagaggttctctggagggtggagaatgagg
gtgtccctcgccagagctctgttcatggagcccactctgctgatgctggacgaacccacc
aaccacctggacctgaacgccgtcatctggctcaacaactaccttcaaggctggaagaag
actctcctcatcgtttcccatgaccaaagtttccttgacgatgtgtgcactgatatcatc
cacctggacaacgagaagctctactactacagagggaactacttgaccttcaagaagatg
tacgtgcagaagcagaaagaactacagaaacagtacgacaagcaggagaagaagctgaag
gacctgaaggctggtggcaagtccaccaaacaggcagagaagcaaaccaaggtcgacctg
accagaaagcagcagaaaggcaagaagaaaggagctcaggaggaggagagccaggatgcc
acggagctgctgaagaggcccagagagtacaccgtcaagttcaccttccccaacccgccg
ccgctgtccccgcccatcctgggactacactgtgttgactttggctacactgctcagaag
cctctcttcaaaaacgtggactttggaatcgacatggactcgaggatttgtatagttgga
cccaatggtgtcgggaagagtaccctgcttctgctgctcactgggaagctaagtccttct
aaaggtgagatgaggaggaatcatcgcttgaaagtgggcttcttcaaccagcagtacgcc
gatcagctgaacatggaggagaccgccacagagtacctcatgaggaacttcaatctcccc
taccaggacggcaggaagtgcctgggacgcttcggcctggagagccacgcccacaccatc
cagatctctaagctgtcgggcgggcagaaagccagggtggtgtttgcggagctgtcctgc
cgtcagcccgatgtgctgatcctggacgagcccaccaacaacctggacatcgagtccatc
gatgccttatcggaggccatcaatgagtataaaggagctgtgatcatcgtgagtcacgac
gcccggctcatcacggagactcagtgcaccatgtgggtggtggaggacagcacggtgaac
cagatcgacggagactttgacgactacaagcgggaggtgcttgagtctctgggggagacc
atggtcaacaaggtcaacccgtga
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