Gasterosteus aculeatus (three-spined stickleback): 120829831
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Entry
120829831 CDS
T07457
Symbol
plxna3
Name
(RefSeq) LOW QUALITY PROTEIN: plexin A3
KO
K06820
plexin A
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
Sema
TIG_plexin
PSI
Motif
Other DBs
NCBI-GeneID:
120829831
NCBI-ProteinID:
XP_040050267
LinkDB
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Position
XII:238705..276951
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AA seq
1809 aa
AA seq
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MSRLSVSVLRLDSSDNVNKLLLVDYTGNRLVACGSIWQGVCQFLRLEDLFKLGEPHHRKE
HYLSGAREADGMAGVVVGEDDWAADPKRKRPAKGGSRLFIGAAIDGKSEYFPTLSSRKLV
ADEESVNMFSLVYQDEFVSSQIKIPSDTLSLYPAFDIYYVYGFSSRTYVYFLTLQLDTQL
TQMDAGGEKFFTSKIVRMCSNDTEFYSYVEFPLGCTKDGVEYRLVQAAFRQKPGRRLAQA
LGLSEEDDVLFVVFSQGQKNRSNPPRETVLCLFTLQHINLAMRERIRSCYRGEGRLSLPW
LLNKELPCIHTPKQIGDDFCGLVLNQPLGGLRVIEGSPLYEDRTEGMGAVAAYTYGEHTV
VFVGTRSGQLKKIRVDGITPPAQNALLYETVMVVEGKPILRDMVFSPDHQHIYLLSDRQV
SRLPVESCERYSSCSACLGSGDPHCGWCVLFNKCSRQEACNKWEEPQHFNTRLEQCVDIT
VTPSNMSVTSPQTQLTLWVRNVPALLGGVSCVFEELNETPGEVQAKGQVMCMSPSLRDLP
SHTHSYGEKRVVHLGLRSTETGLQFISTNFIFYNCSVLNSCTSCVSSVFPCHWCKYRHVC
TNNLQDCSFQEGRVSSIEGCPQILPTADILVPAGMVRPITLRARNLPQPQSGQKNYECVF
HIQGKVQRIPAVRFNSSCIQCQNTSYWYEGDEAGDLPVDFSIVWDGDFFIDKPPSMKALL
YKCEAQRSSCGQCLKAPTAFECGWCSDSRRCLLRTHCPSAEQSWMHHGRHNLRCSHPRIA
RIDPLTGPREGGTRVTIEGENLGLQVKEIAHVQVAGVRCNPVPAQYISAERIVCDMAEAL
LPHSPGGPVELCIGVCSSEYRTLSTQTYSFVSPVFTRVLPERGPVSGGTRLAVTGRNLDA
GSSVTVFIDKEECLFVKRTNREIICITPASLSGPGPAPIRLMIDRAEVTSSETKYVFTED
PTVSSIEPNWTILNGSTVITVTGTNLRTIQEPKVRAKYRGVETSNFCSALNDSTMTCLAP
GLIYGEPDPPEGALHPDEFGFIFDQVSSLLVLNSTPFTHYPNPTFDPLGSSGILEVKPGS
PIILKGKNLVPVAPGNNRLNYTVLIGESPCLLTVSENQLLCDSPDLTGEQRVLILVGGLE
YSPGTLHIYSDSALTLPAIIGIGAGGGVLLIAIIAVLIAYKRKTRDADRTLKRLQLQMDN
LESRVALECKEAFAELQTDIQELTNDMDGVKIPFLEYRTYTMRVMFPGIEEHPVLKELDS
PANVEKALRLFSQLLNNKMFLLTFIHTLEAQRSFSMRDRGNVASLLMAALQGRMEYATVV
LKQLLADLIEKNLENRNHPKLLLRRTESVAEKMLTNWFTFLLHRFLKECAGEPLFMLYCA
IKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKQQTLMCIPPEGEAVTEVPVKVLNCDT
VTQVKDKLLDAVYKGIPFSQRPQADDMDLEWRQGRLTRIILQDEDVTTKIESDWKRLNTL
AHYQVTDGSLVALVQKQVSAYNIANSFTFTRSLSRYESLLRTSSSPDSLRSRAPMITPDQ
ETGTKLWHLVKNHEHSDQREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETVFSTAHR
GSALPLAIKYMFDFLDEQADKRQISDPDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSS
ITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPNYKSWVERYYRDITKMPSIS
DQDMDAYLVEQSRLHGTEFNTLSALSELYFYINKYKEEILTALDRDGYCRKHKLRHKLEQ
AINLMSGSS
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcctgtctgtctctgtcctcaggctggactcgtccgataacgtgaacaagctc
ttactggtggattatactgggaaccgactggtggcgtgcggctccatctggcagggcgtc
tgtcagttcctcaggctggaggacctcttcaagctgggggagcctcaccaccgcaaagag
cactacctgtctggagccagagaggctgatgggatggcaggcgtggttgttggtgaggac
gactgggcggccgacccaaagaggaagaggccagccaagggcggcagccgcctcttcatc
ggcgccgccattgacggcaagtcggagtacttccccacgctgtccagcaggaagctggtg
gcggacgaggagagcgtcaacatgttctcgctggtctaccaggacgagtttgtctcctcg
cagatcaagattccctcggacacgctgtccctctacccggccttcgacatctactacgtc
tacggcttctccagccgcacctacgtctacttcctcacgctgcagctggacacgcagctc
acgcagatggacgccggcggagagaagttcttcacctccaagatagttcgcatgtgctcc
aacgacacagagttctactcctacgtggagttccctctgggctgcaccaaggacggggtg
gagtaccgcctggtgcaggccgccttcaggcagaaaccagggcgccgcctggcacaggcc
ctgggcctctccgaggaagacgacgtcctgttcgtcgtcttctcccagggtcagaagaac
cggtccaacccgcccagggagacggtcctgtgcctgttcaccctgcagcacatcaacctg
gcgatgagggagaggatccgctcctgttatcggggggagggccgactctcgttgccgtgg
ttactcaacaaggagctgccctgcatccacacgccgaagcagatcggggatgatttctgc
gggctggtcctgaaccagcctctgggggggctgcgggtcatcgaggggagcccgctctac
gaggaccggaccgagggcatgggcgccgtggcggcctacacctacggcgagcacacggtg
gtgtttgtgggcacgcgcagcggacagctgaagaagatccgcgtggatggaattacccct
ccggcccagaatgcattgctgtacgagacggttatggtggtggaagggaagccgatcctg
agagacatggttttcagtccagaccaccagcacatctacctgctgagtgacagacaggtg
agccggctgccggtggagagctgtgagcggtacagcagctgctcggcctgcctggggtcc
ggagacccccactgtggctggtgtgtgctcttcaacaagtgttccagacaggaagcatgt
aacaagtgggaggagcctcagcacttcaacacccggcttgaacagtgcgtcgacatcacc
gttaccccgagcaacatgtctgttacttccccacaaacacagttgaccctctgggtgcgg
aacgtcccggccctgttggggggcgtgtcctgtgtgttcgaggagctgaatgagaccccc
ggagaggtccaggccaaaggtcaggtgatgtgtatgtcaccgtcactgagagacctgccc
tcgcacacacactcctacggagagaagcgagtggtccatctcggcctgcgctccactgag
acgggacttcagttcatcagcaccaactttatcttctacaactgctctgtgctcaactcg
tgtacttcctgtgtcagcagcgtgttcccgtgtcattggtgtaaatatcgtcacgtctgc
accaacaacctgcaggactgttccttccaggaggggcgggtcagcagcatagagggctgc
cctcagatcctccccaccgccgacatcctggtcccggccgggatggttcgaccaatcacg
ctgcgcgcccggaacctccctcagccgcagtcgggtcagaagaactacgagtgcgtcttc
cacattcaggggaaagtccagcgcatcccggcggtccgcttcaactcgtcctgcatccag
tgccagaacacctcgtactggtacgaaggggacgaggctggagacctcccagtggacttc
tccatcgtgtgggacggagacttcttcatcgacaagccgccgtctatgaaagccctgctg
tacaagtgtgaggctcagcgctccagctgtggtcagtgtctcaaagctcccacggccttt
gaatgcggctggtgctccgacagcaggcgttgtctcctgaggacacactgtccctcggcc
gagcagagctggatgcaccacggccgacacaacctgcgctgcagccacccgcgcatcgcc
aggattgaccctctgaccggcccccgagaggggggcacgcgggtgaccatcgagggggag
aacctgggcctgcaggtgaaggagatcgctcacgtccaggtggccggcgtccgctgcaac
cccgtccccgcccagtacatcagcgccgagaggatagtgtgtgacatggcggaggccctc
ctccctcactctcctggaggaccggtggaactttgtatcggcgtgtgcagctccgagtac
agaactctgtccactcagacgtactccttcgtgagcccggtgttcactcgggtcctcccg
gagaggggtcccgtctccgggggaaccaggctggcggtgacaggccgtaatcttgacgct
ggcagctcggtgacggtgtttattgataaggaggaatgtctctttgtcaaacggaccaat
cgggagatcatctgcataactcccgcctccctgtcgggccctggtcccgcccccatccgc
ctgatgattgacagggccgaggtgacgagctcggagacaaagtacgtcttcacggaggac
ccgacggtctccagcatcgagcccaactggaccatcctcaatggcagcacggtgataacc
gtgacgggaaccaacctgaggaccatccaggagcccaaagtcagagccaagtacagaggc
gtggaaaccagcaacttctgttctgccctgaacgacagcacgatgacgtgtttggcgccc
ggtctgatatacggcgagccggacccaccagagggggcgctgcaccccgatgagttcggc
ttcatctttgaccaggtctcctctctgctggtcctgaactccacccccttcacacactac
cccaaccccacctttgaccccctggggagctctggcatcctggaggtcaaaccggggtca
ccgatcatcctgaaggggaagaacctggtccctgttgcccccggcaacaaccggctgaac
tacaccgtgctcatcggggagtccccgtgtctcctcaccgtgtcggagaaccagctgctc
tgtgattcgccggatctcaccggagaacagcgagttctgatcctggtggggggtctggag
tactcgccgggcacgctacacatctactccgacagcgccctgacgctgcccgccatcatc
ggcatcggggcgggcggcggcgtgctgctcatcgccatcatcgccgtgctcatcgcctac
aagaggaagacccgcgacgccgaccgcacgctcaaacgcctccagctgcagatggacaac
ctggagagccgcgtggcgctggagtgcaaggaggccttcgccgagctgcagacagacatc
caggagctgaccaacgacatggacggggtgaagatcccgttcctggagtaccggacctac
accatgagggtcatgttcccgggcatcgaggagcacccggtgctgaaggagctggactct
ccagccaacgtggaaaaggctctgcgtctcttcagccagctgctcaacaacaagatgttc
ctgctgaccttcatccacacgctggaggcccagaggtcgttctccatgagggaccgcggc
aacgtggcctcgctgctgatggccgctctgcagggtcgtatggaatacgctacagtggtg
ttaaaacagctgctggccgacctgatcgagaagaacctggagaaccgaaaccatcccaag
ctcctgctgaggaggacggaatccgtggctgagaagatgctgaccaactggttcaccttc
ctgctgcatcgcttcctcaaggagtgtgcaggcgagcctctcttcatgttgtattgtgcc
ataaagcagcagatggaaaaaggtccgatcgacgcgatcacaggagaagctcgttattct
ctgagtgaagacaaactgatcagacagcagatcgactacaagcagcagaccctgatgtgc
atccccccggagggcgaggcggtgacggaggtcccggtaaaggtgttgaactgtgacacg
gtgacccaggtgaaggacaagctgctcgacgccgtctacaaaggcatccccttctctcag
aggcctcaggccgacgacatggacctcgagtggcgacagggtcgactgaccaggatcatc
ctgcaggacgaagacgtgacgacaaagatagagagcgactggaagaggctgaacacactg
gcccactaccaggtaacggacggctctctggtggcgctggtccagaagcaggtttctgcc
tacaacattgccaactctttcaccttcaccagatctctgagcagatacgagtcgttactt
agaacgtccagcagtcctgatagtctgcgatccagagctcctatgatcaccccggaccag
gagacgggcactaaactgtggcacctggtgaagaaccacgagcacagcgaccagagagaa
ggagaccgaggcagcaagatggtttctgagatctacctgaccaggctgctggctaccaag
gggacgctgcagaagtttgtggacgacctgtttgagacggtgttcagcaccgcccaccgg
ggctctgctctcccattggctatcaagtacatgtttgacttcctggatgagcaggccgac
aagcgacagatcagcgacccggatgtccgacacacttggaagagcaactgccttcctctc
aggttctgggtgaacgtcattaagaatcctcagtttgtgtttgacatccacaagagcagc
atcactgacgcctgtctgtcggtggtcgcccagaccttcatggactcctgctccacttcc
gaacaccggctcggcaaagactccccgtccaacaagctgctctacgccaaggacatcccc
aactacaagagctgggtggagaggtactacagggacattacgaagatgcccagtatcagt
gatcaggacatggacgcctacctggtggagcagtcccgtctgcacggtaccgagttcaac
acactgagcgcgctcagtgagctctacttctacatcaacaagtacaaggaagagatcctg
acggcgttggaccgcgacggctactgtcgcaaacacaagctgaggcacaaactggagcaa
gccatcaacctgatgtctgggagcagctga
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