Gasterosteus aculeatus (three-spined stickleback): 120830975
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Entry
120830975 CDS
T07457
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03022
Basal transcription factors
gat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120830975 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
120830975 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120830975 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120830975 (gtf2h2)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120830975 (gtf2h2)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120830975 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
120830975
NCBI-ProteinID:
XP_040051962
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All DBs
Position
XIII:418575..426904
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVTESHGQVRLGMMRH
LHVVIDCSRTMDDHDLKPNRLTASLKLLETFVEDYFDQNPISQLGLITTKNKRAEKLTDL
AGNPKKHIVALKKAVDTVCIGEPSLYNSLHLAIQTLKHMPGHTSREILVILSSLTTCDPA
NICELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTVAYLSDQDAKPSFSMAHLDSSGGAGLSLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFTESPAEGLHVDRFCQACQGELKDKSIFTC
PICGGVFCSECDLFIHDSLHCCPCCIHNPSNP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagaaccaagcgctgggaaggcggctatgagaggacatgggag
gtgctgaaggaggacgaatctggctccctaaaagccacagtagaagagatcctgttccag
tccaaaaggaaaagggtcacagagagccacggacaagtgcgccttggaatgatgcgacac
ctccacgtggtgatcgactgttcaagaactatggacgaccatgacctgaaaccgaaccgc
ctcaccgcctccctgaagctgctggaaacctttgtcgaggactactttgaccaaaacccc
atcagccagctgggcctgatcaccaccaagaataaaagagcagagaagctgactgacttg
gcaggaaatccaaagaaacacatcgttgccttgaagaaagcagtggacactgtgtgtatc
ggcgagccgtccctttacaactctctccacctggccatacagacactcaagcacatgcct
ggacacaccagtcgggagatcctggtaatcctcagcagcctcaccacatgtgaccccgcc
aacatctgtgagctgattaagaccctgaagtctctgaaggtgagggtctctgtgattggc
ctgtcagcggaggtcagggtgtgtacggtattgacccgggagacgggcggctcctaccac
gtcatcctggatgagagtcacttcaaagagctgctgatgctgcacgtcaaaccgccccca
gccagctcctcatccgagtgctcgctgatacgcatgggttttcctcagcacaccgtcgcc
tacctgagtgaccaggacgccaagccctcattcagcatggcgcatctggacagtagcggt
ggtgccggtctgtctctgggaggatacttctgtccgcaatgccacgccaagtacaccgag
cttcctgtggagtgtaaagtctgtggtttgactctggtgtcggcgccccatctggccaga
tccttccaccaccttttccccctccaagccttcacggagagccctgcagaggggctccac
gtagacaggttctgtcaggcttgtcaaggggagctgaaagacaaaagtatattcacctgt
ccgatatgtggaggtgtgttctgttcggagtgtgatctcttcatccatgactcgctgcac
tgctgcccctgctgtattcacaacccaagcaacccctga
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integrated database retrieval system
