Gasterosteus aculeatus (three-spined stickleback): 120834961
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Entry
120834961 CDS
T07457
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120834961 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120834961 (usp4)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120834961 (usp4)
Peptidases and inhibitors [BR:
gat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120834961 (usp4)
Ubiquitin system [BR:
gat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120834961 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
DUF1609
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
120834961
NCBI-ProteinID:
XP_040059318
LinkDB
All DBs
Position
XVII:complement(9506810..9518872)
Genome browser
AA seq
1044 aa
AA seq
DB search
MMAEGGGPEPGGAADTDSEPVAAQMPTPSTEKQKQTIGSLLKTTLRKGDDWYLIDSRWFK
QWKKYVGFDSWDMYNVGEHSLYPGPIDNSGLFSDQETQALKEHLIDELDYVLVPTDAWKK
LVSWYGCLEGQKPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTID
TIEKEMRTLFNIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGT
WPRQASHPKSSTTPSRNFTTSPKLSSNSTASISSTVTNGDSSCSPSYTLNNSTSSGNRLG
GYNSYSSSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINR
ENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLALRDAEGRADEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC
PECSMVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPQSRPTQYRVVVPKLGTVTDLCTA
LSKLCGFPQENMVVADVYNHRFHKVYRRDDGLNQIMEKDDIFVYEVQEENSERMNLPVYF
RERHSKHAGSSSSTMLFGQPLLVTVPRLNLTADILYDKILERIGRYVKQSQNPNSQSMAT
ASASASASTSASASASASVSASASSSAPPSASASASATIASCSQAPECSTSSGVNASLRG
CGSPPSEGASCSASSSNGSNHSGTCRETNGLYDAEEEAMDHQVSPEPENGQSEEDEEETS
DLEAGSKGAVSKQRSSPAKLFSFSIVNSYGTANISPLPCDGNLLKLNPHSTVAIDWDAAS
KKLCYDEQEAEAYEKHESMLQAQKKKATVALRECTELFTTMETLGEHDPWYCPTCKKHQQ
ATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFVCDPKAGPYVYDL
VAVSNHYGGMGGGHYTAYGKNKVDGKWYYFDDSSVSSASEDQIVTKAAYVLFYQRRDEEA
PSKPQPSASVGGAPEAADDHMDTN
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgaaggaggcggacccgagccgggtggcgcggcagacaccgactccgagccg
gtagccgcacaaatgccaaccccttcaaccgaaaagcaaaagcagactattgggtcacta
ttgaagactactttaagaaagggtgacgactggtatctaatcgacagccggtggttcaaa
caatggaagaagtacgttggatttgacagctgggacatgtacaatgttggagaacatagc
ctgtatccaggaccaattgataactccgggcttttctctgaccaggagactcaggccctg
aaggagcaccttatcgatgagctggactatgtccttgtccccactgacgcttggaaaaag
ctggtcagctggtacggatgtcttgagggccagaaacccatcgtccgaaaggttgtggaa
catggcatgtttgtcaagcactgtaaggtggaggtctatttgctggagctgaacttgtgt
gagaatgacaacatggacaatgttgtcacgcgtcatttcagtaaagctgatactatagac
actatagagaaggagatgagaacactgttcaatatcccatcggagaaggagacacggctg
tggaacaaatacatgagcaacacctatgagcagctgaacaagcccgacagcactgtgcag
gatgctggtctcttccaggggcaggtgcttgtgattgagcggaagaacgaggatggcacg
tggcccagacaagcctcccatcccaaatccagtaccaccccatccaggaatttcactacc
tccccaaaactctcctccaactcaacagccagtatctcctcaacagtaaccaatggagac
agcagctgtagccccagctacacgcttaacaacagcacatcctccggtaacagattgggg
ggctacaattcatacagctcctcctacaactacagagagtcccagtcacagcctggactg
tgtggtctcagtaatttgggcaacacatgcttcatgaactctgcccttcagtgcctgagc
aatgcatctccactcacagaatacttcctcaatgaccagtatgaggctgagattaaccga
gagaaccccctgggcatgaggggggagatcgcagaggcctacgcggacctagtcaagcag
atgtggctgagccgaagcagctacgtggccccgcgtaccttcaaaacccaggtcggacgt
tttgccccccagttttcaggctaccagcagcaggactcccaagagctgttggccttcctg
ctcgacgggctccatgaagatctcaaccgtgtcaagaagaagccttatctggccctaagg
gatgcagagggtcgtgcagacgagattgttgcaaaagaagcctggacgaaccaccgcttg
cgcaatgactcgattatagttgatattttccacggcctcttcaaatccactttggtgtgc
ccggagtgctccatggtgtccgtgacctttgacccgttctgctacctcacactgcctctg
cccatgaagaaggaccggactatggaagtgttcctggtgcgatcagaccctcagtccaga
cccacacagtatcgagtggtggttcccaaacttggaacagtgacagacctgtgcaccgcc
ttgtccaaactctgtggattccctcaagaaaatatggtggtagctgacgtttacaatcat
aggttccacaaagtctatagacgcgatgatggtctaaaccaaatcatggaaaaagatgac
atctttgtgtacgaggtgcaggaagagaacagcgagaggatgaacctgcctgtttatttc
agggagcggcactccaagcatgcaggaagttcctcgagcactatgttgtttggccagcct
ttactcgtcaccgtgcccagacttaacctcacagcagacattctttatgacaagatcctc
gagaggattgggcgctatgtcaaacaatcccagaacccaaacagtcaaagcatggcgacg
gcctcagcgtctgcatcggcctcaacgtcggcctcagcatcggcctcagcctccgtatcg
gcctcagcatcgagctcagcgcccccctcggcgtcggcctcagcctcggcgaccattgca
agctgcagccaggctcctgaatgctcgacctcgtctggtgtcaatgccagcctgaggggc
tgtggcagccccccatcagaaggggcctcgtgcagtgccagctcaagtaacggcagcaac
cactcgggcacctgtcgcgaaaccaacgggttatatgacgctgaggaggaggccatggac
caccaggtgagtccagagcctgaaaatggtcagtctgaagaggatgaagaagagacctca
gacttggaagctgggtctaaaggagccgtgtctaagcagcgctcctctccagccaaactc
ttcagtttcagcatcgtcaactcttacgggaccgcaaacatcagcccgctgccctgtgat
ggaaatctcctcaaacttaacccacattccacggtggcgatcgactgggacgcggcatcg
aagaaactgtgctacgacgaacaggaagcggaggcctatgagaagcacgagagcatgctc
caggcccagaagaagaaagccaccgtggctctgagggaatgcaccgagctcttcaccacg
atggagacacttggagaacacgacccatggtattgtccaacatgtaagaaacaccaacag
gccacaaagaagtttgacttgtggtcgctgccgcgcattctggtagttcatctaaagcgg
ttctcctacaaccggtgctggagagacaagctggacacagtggtggacttccccatcagg
gatctgaacatgtctgagtttgtgtgcgacccaaaggccggcccctacgtatacgacctc
gttgccgtgtcaaatcactatggaggaatgggagggggccactacaccgcttacggcaag
aataaagtggacggaaagtggtattactttgatgacagcagcgtctcctctgcctcagag
gaccagattgtgactaaagcagcatatgtgctgttctatcagcgcagggacgaggaagcc
ccctccaaacctcagccttcggcctcagtgggaggagccccggaagcagccgatgaccac
atggacacaaactga
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integrated database retrieval system
