Gasterosteus aculeatus (three-spined stickleback): 120835139
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Entry
120835139 CDS
T07457
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120835139
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120835139
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120835139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
Crescentin
zf-ANAPC11
zf-RING_5
Gp58
zf-C3HC4_4
COG3_N
HIP1_clath_bdg
zf-RING-like
Lzipper-MIP1
zf-RING_16
Zn-ribbon_8
KxDL
WEMBL
KASH_CCD
Laminin_II
Sec3_CC
Fez1
CALCOCO1
ATG16
RINGv
CENP-F_leu_zip
bZIP_1
FANCL_C
ADIP
zf-Nse
DUF6776
GAS
SLX1_C
zf-RING_4
Spectrin
MAD
Motif
Other DBs
NCBI-GeneID:
120835139
NCBI-ProteinID:
XP_040059688
LinkDB
All DBs
Position
XVII:20012847..20017377
Genome browser
AA seq
449 aa
AA seq
DB search
MPIRAYCTICSDFFDHSKDVAAIHCGHTFHYDCLLQWFQTAPTKTCPQCRKQVSTRHIIN
KLYFDIGEEQEGTTDPESLQNELDRMKVLLSSKERDWRDKQKTVDNLKDVVDKQRRDLDS
VRKDVMEKEMLCSSLRKQMTYLETQQNETQAAKEEARKLRTRMKAFESLDVLLQGQRAEV
ESMISDMGVSQAAVEQLSIYCISLKKEYDNLKGSLKSTNDMCEKLKREVLSSNNKLHKAT
VEVNRTRDDMKSLQNDLANADKEISSLKKKVEFLQRTLSTPTRTNEALSRLVFESPAPVE
LKQPRLHQPADSHDIDLNTTYDVTTPDGLAKRQTQFQSKKMRLDPPASSVSKHFEKSSSL
SKTRDEDCSLDPFLRNSLLFRKKTFGSMLDPQRKLGVVSSGYDGLGGRTKFIQPSPLSEI
RPLMKAKRKKVTRPQPRMAPCMTLDGFLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccgagcatattgcacaatatgctcggacttcttcgatcactccaaagatgtt
gctgccatccactgcggacacacgttccactatgactgtcttcttcagtggtttcagacg
gctcctacaaaaacctgtccacaatgtagaaagcaggtcagcaccagacacattatcaac
aagctgtactttgacatcggtgaagagcaggagggcacaacggacccggaaagcttgcag
aatgagcttgatcgaatgaaggtgcttttaagctccaaagaacgagactggcgggacaag
cagaagacggtggacaatctaaaggacgtcgtggacaagcagaggagagacctggacagt
gtacggaaggatgttatggaaaaggagatgctttgttctagcctcagaaaacagatgacg
taccttgagacgcaacagaatgaaactcaagctgccaaggaggaagcccggaaactccga
accagaatgaaagcctttgagagcctggatgtgttgttgcagggccaaagagcagaggtg
gagtccatgatctcagatatgggtgtgagccaggcagcagtggagcagctttccatctac
tgcatctcgctcaaaaaagagtatgacaatctaaaaggaagcttgaagtctacaaatgac
atgtgtgagaagctgaagcgagaagtgctctcctcaaacaacaagttacacaaagccacg
gtggaggtgaatcgcaccagagatgacatgaaatctctgcagaacgatttggccaacgcg
gacaaggagatctctagccttaagaagaaagtggagtttcttcagaggactctgagcacc
ccgacacggacaaacgaagccctaagccggctcgtctttgagagcccggcgccagtggag
ctgaagcagcctcgcctccaccagcccgccgatagccatgatattgacctgaacacgacg
tacgacgtcactacgccggacggtttggccaaaagacaaacgcagttccaatccaagaag
atgcggctggatcctccggcgtcgtctgtgtccaaacactttgagaaaagttcctcctta
agcaagactcgagacgaggattgttccctggatccttttttgcggaactccctcctcttc
agaaagaagactttcggcagcatgttggaccctcagaggaagctcggagttgtgagcagt
ggttacgacggtttgggaggacgtaccaagttcatccaaccctctccattatcagagatt
cgcccgctgatgaaagctaaaaggaaaaaggtaaccaggcctcaacccaggatggcacct
tgcatgactctggacggcttcctcgagtga
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