Gasterosteus aculeatus (three-spined stickleback): 120835544
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Entry
120835544 CDS
T07457
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120835544 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120835544 (gli1)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120835544 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
120835544
NCBI-ProteinID:
XP_040060496
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All DBs
Position
XVII:5786941..5826078
Genome browser
AA seq
1470 aa
AA seq
DB search
MPVDMQPHQGLYHYETSPSHPSRGLVPSDQSPYTDVSSLRAPLLNGHPQDCRAMYNPMTP
SMAHGSGQGIGNCMDQYMRPPQAPPPHSMMGHRGMPPTDGGNSTAYCNQNNMMSSHHNFC
QFQSSSDQIGSGDGSRFSTPRSILKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVN
SRCNPNGASSYGHLSVSAMSPSLGYSSNINCQSRQQVSMYGGGGGTPLGGHSTGPCQASR
LPPHNPRLHAPPKHGHLKTEPGLGGVMDGMNVKSLEERSEGDVASPSSTGTQDPLLGLLD
GRDDLDKEDGKPEPEAIYETNCHWESCNKEFDTQDQLVHHINNEHIHGEKKEFVCHWQEC
SREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEH
EGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITK
KHRGDTGPRPPGSAMTPGGQSSELLLEKEETRREDCKLLAPETTLKSQPSPGGQSSCSSE
RSPLGSANNNDSGVEMNLNAAGSLEDLTALEDGVAGGGEPVGVGTMGMSSQALKRLENLK
IDKLKQIRRPTPPGRCSNNRLPALPGPGENMGMCAPSPLLSNRRVMELSNHELGGGAPIG
CSSNDRRGSGTSSLSSAYTVSRRSSMVSPHLSSRRSSEVSQMGGTGGGGCHHLSAEKSVG
DPLSPETNRRGAPCPGGGLPGLPNLTPAQQYSLKAKYAAATGGPPPTPLPNMEQPGTPAR
RGVLSEYQGQPLPPFLQKGGPRRHSANTEYGTGVIYPHQAPGNHSRRASDPVRSVADPQA
LPKRFNSLNNVAMMGRRNALHRGSDTSLARHLYSPRPPSITENVMMEAMGMEPHLAPIDA
RDRSMMMPPGERSFMGYQQQHQSLGGVGGPLGNQLSPSHDSLSCPDQVYMQGPYQNQGGE
VTSRAGGNPMGQVRPIHSEGISNALLQQAEYSMSTCQLSPSGPHYPSIGQGGDAGGPWSD
SHGQIQTSNHALQNQRGLQYSDPSLQPQQTQAHFNNQTGLYSSPDGTHKLTIKPEQQFHP
GMGGGNACQSAKLQQQQRMLVQQPQGYPQQTGQVLMGNSNNPSCDFQGQNQNSFPAAGGL
SLGCAGTALADGQRSETPMMQVKEMMVRNYVQSQQALMWEQQQEQQQQSGIKPPPLSDNM
DMSGQTAIMQHSPQHQNQTLYSSQPYPSYPNQNLAMSPPGHSRGPGSVTPKDQQLAGLQV
SCYGQEMVVPRPPQGRKPLSRQNSLSQVGVGYLGSPPHLSPVHSASSPRRVVRLPPVQHP
QHQQNEMFSPSNNNMYYSGQISMDMDKHMDPQIGTCLNQPHTMRSNLDPTGGTKTSPMTP
YPESGPISNALEHLDLDNARIDFTSIIDDAESSSFSPINNPLHGLPGSSSQASSRLTTPQ
TSGLSNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacaccaggggctgtaccactacgagacctcacccagccat
ccctccagaggcctcgtcccatcagaccagtctccatacaccgatgtgtcctcgctgcgc
gcccccctcctcaacggccatccccaggactgccgcgccatgtataatcccatgactccc
agcatggctcatggatcaggacaggggattggcaactgcatggatcaatatatgaggccc
cctcaggcgccaccgccacacagcatgatgggccacagaggcatgccgcccacagacggt
ggcaacagcactgcctactgtaaccagaacaacatgatgtcctctcatcacaacttctgc
cagttccagtcctcctctgatcagattggctcaggtgatggctccaggttctccacacct
cgctccatcctgaagctgagtaaaaagagggccctgtccatctctcctctgtctgatgcc
agcgtggacctgcagaccgtgatccgaacatcacccaactccctcgtggccttcgtcaac
tctcgctgcaacccaaacggtgccagttcctacggacacctctccgtgagcgccatgagc
ccgtccctcggctattccagcaatataaactgccaatccaggcaacaagtgtccatgtat
ggaggaggcggggggacacctcttggaggacactcaacaggtccttgccaagcgtcccgc
ttaccgccccacaatcctcggctccacgctccgcccaagcatggacatctaaagacggag
ccggggctgggaggtgtgatggacggcatgaacgtaaagagcctggaggagcggtcggag
ggcgatgtggccagtccttcctccactggcactcaggaccctctgctgggtctactggac
ggcagagatgacttggacaaggaggacgggaagcccgaaccagaggccatctatgaaacc
aattgtcactgggagagctgcaacaaagaatttgacacgcaagaccagctagttcatcac
atcaacaatgagcacatccatggagagaagaaggagtttgtgtgtcactggcaggaatgc
tctcgagaacaaaggcctttcaaagcccagtacatgctggtggttcatatgcgcagacac
acgggagagaagccacataagtgcactttcgaaggctgtaacaaggcctactctcgcctg
gagaatttgaaaacccacctgcgctctcacacaggagagaaaccctacgtgtgtgaacac
gaaggctgcaacaaggccttctccaatgcttcagaccgggccaagcaccagaaccgaact
cactccaatgagaaaccgtatgtatgcaagattcccggctgcacaaagcgctacacagat
ccaagctctctgcgtaaacacgtgaaaacggtacatggccctgaagcccacatcaccaag
aagcatcgtggggacacaggacctcgaccccctggttcagcgatgacccctggaggccag
agctctgagctactgctggagaaggaggagacacgcagagaggactgcaagctgttggct
cctgagactactctgaaatcccagccaagccctggcggtcaatcatcttgcagtagcgaa
cgttctccactggggagcgccaacaacaatgacagcggggttgagatgaacctgaacgca
gctggcagtctggaggatctcaccgcactggaggatggagttgccggtggaggggagcca
gtaggtgtcggaacaatggggatgtcctctcaggctttgaagaggctggagaacctgaag
atcgacaagctgaagcaaatccgcagaccgacccctcccggccgctgttccaacaacagg
ctgcctgcacttcctggtccgggagagaacatgggaatgtgtgcaccatctcccctgctc
tcgaatcgccgcgttatggagctgtccaatcacgagttagggggcggcgcgccgattggc
tgctcttctaatgacaggagaggcagcggcaccagcagtctaagctctgcttacaccgtc
agccgccggtcctccatggtgtctccgcacttgtccagccggcgctccagtgaggtctcc
caaatgggaggaacgggaggcggcggatgccaccacctcagtgcagagaagagcgtgggc
gaccccctgtctccggagaccaatcgcagaggtgctccctgtcccgggggaggactgccg
gggcttcctaatttaacaccagcccagcaatacagcctaaaggccaaatatgctgcggca
accggcggaccaccacctactcctttacccaacatggagcagccaggcactccagctaga
agaggtgttttgagtgagtaccaggggcagcctctgccccccttccttcaaaaaggtggc
ccgcgtaggcacagtgccaacacagagtacggcaccggtgtcatctacccccaccaggct
ccaggtaaccacagccggcgagccagcgacccggttcgatcggtagcagatccacaggct
ctccccaagcgcttcaacagcctgaacaacgtggccatgatgggcagaaggaatgcgctg
caccgcggctctgacacaagtctcgcccgccacctgtactcccctcggccacctagcatt
acagagaatgtaatgatggaggccatgggcatggagccccacctggcccctattgatgcc
agggaccggtccatgatgatgccccctggggagaggagcttcatggggtaccagcagcaa
catcaaagtcttgggggagttgggggtcctcttggaaaccagctgtccccaagccatgac
tctctgagctgcccagaccaggtgtacatgcaggggccgtaccagaaccagggaggggaa
gtaacttccagggctggtgggaatccaatgggacaagtacggcctattcactcggagggc
atatctaatgcgcttctgcagcaggccgagtacagtatgagcacctgccaactcagtccc
tcaggcccccattaccccagcataggccagggtggagatgctggaggcccttggagcgat
tcccacggccaaatccaaacttccaaccatgctctccagaaccagcgagggctgcagtat
tcggatcccagcctgcagcctcaacagacgcaggcccacttcaacaatcagacaggcctc
tacagcagtcccgatggaacccacaaactcaccatcaagccggagcagcagttccacccg
gggatgggaggaggaaatgcctgtcagagtgcaaagctgcagcagcagcagcgaatgctc
gtccagcaacctcagggttacccacaacaaacaggccaggtcctgatggggaactctaac
aatcccagctgtgactttcaagggcagaaccagaactccttccccgccgcggggggcttg
agcttggggtgcgctggcaccgctctcgccgacgggcagaggtcagaaaccccgatgatg
caggtgaaggagatgatggtgagaaactatgtacaatcacagcaagcactcatgtgggag
cagcaacaagaacagcaacagcagagtggaataaaaccgcctcccctatctgataatatg
gatatgagtggccagacagcaataatgcagcacagtccacaacatcaaaaccagaccctt
tactcaagccagccttacccgtcctaccccaaccagaacctggccatgagccctccaggc
cacagcagagggcccggctccgtgacgcccaaagaccagcagctggcgggtctccaggtc
tcgtgttacggccaggagatggtggtcccccggccccctcaggggcgcaagcctctcagc
cgccagaacagcctgtcgcaggtaggagtaggctacctcggtagcccgccccacctcagc
cccgtccactccgcttccagccccagacgagtggtccgacttcctccggtgcagcatcca
cagcaccagcagaatgaaatgttctctccttccaataacaacatgtactattcaggtcag
ataagcatggatatggacaaacacatggacccccagattggaacttgcctcaaccagccg
cacactatgaggtccaacctggacccgacaggtggcacaaagacttcccccatgactccc
tatcctgaatctggccccatctccaatgccttagaacacctggacctggataatgctcgc
atagacttcacctcgatcatcgatgatgccgagtcctcctcatttagcccaatcaacaat
cccctccacggtctgccggggtcttcctcccaggcctcatcccgcctcaccaccccccag
acttctggtctgtccaacatggctgtaggcgacatgacgtccatgctcacctcgctggct
ggggagaataaatacctgaacacgctgtcttag
DBGET
integrated database retrieval system
