Gordonia alkanivorans: C5O27_02960
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Entry
C5O27_02960 CDS
T05876
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gav
Gordonia alkanivorans
Pathway
gav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C5O27_02960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gav03400
]
C5O27_02960
Enzymes [BR:
gav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C5O27_02960
DNA repair and recombination proteins [BR:
gav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C5O27_02960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AZZ80181
UniProt:
A0A3T0UVI9
LinkDB
All DBs
Position
complement(630763..631503)
Genome browser
AA seq
246 aa
AA seq
DB search
MGTRRHFRDPGFRDLAELDALLIDCRACPRLVEWREQVAREKRRAFADQEYWGRPVPGIG
PADARLLIVGLAPAAHGGNRTGRMFTGDQSGDFLFSAMYLAGLVSQPHSVSMDDGLELFD
TRITAPVHCAPPQNKPTVEERDRCSHWLHGELELLAPTARSVITLGAFGWQSTLRTFGAL
GWTVPRPAPKFGHGASTILTRGDAALEVFGCYHVSQHNTFTGRLTVEMLVDVLKAAAESA
GIVPRE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccgacggcactttcgtgatccgggattccgtgacctcgcggagctcgatgcg
ctgctgatcgactgtcgcgcatgcccgcggctcgtcgagtggcgcgaacaggtggcccgt
gagaagcgtcgggcgttcgccgaccaggagtactggggacggccggtcccgggcatcgga
ccggcggatgcgcggttgctgatcgtgggtctcgcgccggccgcccacggcggcaatcgc
accggccggatgttcaccggcgaccagtccggtgacttcctgttctccgccatgtatctc
gcgggcctggtgagtcagccgcactcggtgtcgatggacgacgggctggaactgttcgac
acccggatcaccgcgcccgtgcactgcgctccgccgcagaacaaaccgacggtcgaggag
cgggaccggtgctcgcactggctgcacggtgagctcgaattgctcgctccgacggcgcga
tccgtgatcacactgggcgccttcggatggcagtcgacgctgcgcacgttcggcgcgctc
ggctggacggtgccgcggccggcgccgaagttcgggcacggcgcgtcgacgatcctgacc
cgtggcgacgcggccctcgaggtgttcgggtgttatcacgtgagtcagcacaacaccttc
accggacggctgaccgtcgagatgctcgtggacgtgctgaaagccgcggcggagtccgcg
gggatcgtgccgcgggagtga
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integrated database retrieval system
