Gemmatirosa kalamazoonensis: J421_0903
Help
Entry
J421_0903 CDS
T03025
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J421_0903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gba03400
]
J421_0903
DNA repair and recombination proteins [BR:
gba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
J421_0903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_29
AAA_23
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AHG88440
UniProt:
W0RDN4
LinkDB
All DBs
Position
complement(1030314..1033007)
Genome browser
AA seq
897 aa
AA seq
DB search
MQQYREIKARHQGSILFFRMGDFYETFEDDAVLASRVLGLTLTSRNNGGASDVPLAGVPV
KAVNEYVRRLVARGYRVAICEQVEDPRLAKGIVRREVIETVTPGAAFSDDLLDCTRNNFL
CAVRPAPGALAVAAADVSTGELRLATVPSGDADALLARLAPREVLLPKGGETTQWRAMDG
ALVTEREAWEFDPAMARDDLARQYGVLSLDGLGIGAEDEAALGAAGALLRYLRELQPGGV
PHLARPIVERAGGAMPLDEMTRRNLELVESLRPGVDNDRAGTLLGVLDRTQTPMGTRLLR
QWILAPLTRREDIDMRLDAVAATAGDAIGRATLREALDGVRDVERLASKAAAGRATPREL
RALGDSLGRLPAVHGALERVIGTRDSGLGTRVPDESRVPSPESRLTVIAAAWDDCGELCA
EVTRALVERPPLQLGDESTIATGVDTELDDLRALRDGGKDAIAEIQAAERERTGIQSLKV
GYNKVFGYFIEISNAHRERVPDDYQRRQTLTNGERYVTPDLKAYEEKVLGAAERIEARER
ELFESLRACVGREIARLQRVAGALAELDVLAALAEVAEREGYVRPTLTDGYDLEIVAGRH
PVVERMMAREKFIPNDVTLTQDARLVILTGPNMAGKSTILRQVGLVVLMAQMGSFVPASR
ATIGLVDRLFTRVGASDNLVRGQSTFMVEMTETSAILNTATARSLVLLDEIGRGTSTYDG
VSIAWSVSEHLHDHVGCKTIFATHYHELVQLAEELPAVRNFTVAVREVGDQVLFLHRLVP
GGADRSYGIEVGRLAGLPAPVIARAKEVLALLEGDAATMAESLGRVPAAGKRSRRRAPPA
DQLALFASAPPAAAPNVVPPPPHPVVEALRATDPNHVTPMQALELLARLRAQIHADA
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtaccgcgagataaaagcgcggcaccagggatccatcctgttcttccggatg
ggggacttctacgagacgttcgaggacgatgcggtcctcgcgtcgcgcgtcctcggcctg
acgctcacgtcgcgcaacaacggcggcgcgtccgacgtgccgctcgccggcgtgccggtg
aaggcggtgaacgaatacgtgcgtcggctcgtcgcgcgcggctaccgcgtggcgatctgc
gagcaggtggaggatccgcggctcgcgaaggggatcgtgcggcgcgaggtgatcgagacc
gtgacgccgggcgccgcgttctccgacgacctgctcgactgcacgcgcaacaacttcctc
tgcgcggtgcgtccggcgcccggcgcgctcgccgtcgccgccgccgacgtgtccacgggc
gagctgcgcctcgccaccgtgccgtcaggcgatgccgacgcgctgctcgcgcgcctcgcg
ccgcgcgaggtgctgctgccgaagggcggcgagaccacgcagtggcgcgccatggacgga
gcgctcgtcaccgagcgggaggcgtgggagttcgatcccgccatggcgcgcgacgacctc
gcgcggcagtacggcgtcctgtcgctcgacgggctcggcatcggcgccgaggacgaggcg
gcgttaggcgcggcgggcgcgctgctccgctacctgcgcgagctgcagccgggcggcgtg
ccgcacctcgcgcgcccgatcgtggagcgcgccggcggcgcgatgccgctcgacgagatg
acgcgccgcaacctggagctcgtggagtcgctgcgaccgggcgtcgacaacgatcgtgcc
gggacgctgctcggcgtgctcgatcgcacgcagacgccgatggggacgcggctcctgcgg
cagtggatcctcgccccgctcacccgccgcgaggacatcgacatgcgcctcgacgccgtc
gccgcgacggcgggcgacgcgatcggacgcgcgacgctgcgcgaggcgctcgacggcgtg
cgcgacgtggagcgcctcgcgtcgaaggccgccgcggggcgcgccacgccgcgcgagctg
cgtgcgttgggcgattcgttaggcaggctgccggccgtgcatggagcgctggagcgtgtg
atcgggactcgggactcgggactcgggactcgggtgccggacgagtcccgagtcccgagt
cccgagtcccggctcaccgtcatcgccgccgcgtgggacgactgcggcgagctgtgcgcc
gaggtcacgcgcgcgctcgtcgagcggccgccgctgcagctcggcgacgagtccaccatc
gcgaccggcgtcgacacggagctcgacgacctgcgtgcgctgcgcgacggcggcaaggac
gcgatcgccgagatccaggccgcggagcgcgagcgcacgggcatccagtcgctgaaggtc
ggctacaacaaggtcttcggctacttcatcgagatctcgaacgcgcaccgcgagcgcgtc
ccggacgactaccagcggcggcagacgctgacgaacggcgagcgctacgtcacgcccgac
ctcaaggcgtacgaggagaaggtgctcggcgccgcggagcggatcgaggcgcgcgagcgc
gagctgttcgagtcgctgcgcgcgtgcgtgggacgcgagatcgcgcggctgcagcgcgtg
gccggcgcgctcgcggagctcgacgtgctcgccgcgctcgccgaggtcgcggagcgcgag
ggctacgtgcgccccacgctcaccgacggctacgatctcgagatcgtcgccggccggcat
ccggtggtcgaacggatgatggcgcgcgagaaattcatcccgaacgacgtcacgctgacg
caggacgcgcggctcgtcatcctcacggggccgaacatggcggggaagagcacgatcctg
cgccaggtggggctcgtcgtgctcatggcgcagatggggagcttcgtgcccgcgtcgcgc
gcgacgatcgggctcgtcgaccggctgttcacgcgcgtgggcgcgagcgacaacctcgtg
cgcggtcagtcgacgttcatggtggagatgacggagacgagcgcgatcctgaacaccgcg
acggcgcgctcgctcgtgctgctcgacgagatcgggcgcggcacgagcacgtacgacggc
gtgtcgatcgcgtggagcgtgagcgagcacctgcacgaccacgtcggctgcaagacgatc
ttcgcgacgcactaccacgagctcgtgcagctcgccgaggagctgccggcggtgcgcaac
ttcaccgtcgcggtgcgcgaggtgggcgaccaggtgctgttcctgcaccgcctggtgccc
ggcggcgcggaccgcagctacggcatcgaggtcgggcggctggccgggctgccggcgccg
gtgatcgcgcgcgcgaaggaggtgctcgccctgctcgagggggacgcggcgacgatggcc
gagtcgttaggcagggtgcccgccgccggcaagcgctcgaggcggcgcgccccgccggcc
gaccagctcgcgctgttcgcgtccgctccgccggccgccgcgccgaacgtcgtgccaccg
ccgccacaccccgtcgtggaggcgctgcgcgccacggacccgaaccacgtcacgccgatg
caggcgctggagctcctcgcccgcctccgcgcccagatccacgccgatgcctaa
DBGET
integrated database retrieval system
