Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1944
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Entry
GbCGDNIH3_1944 CDS
T03155
Name
(GenBank) Selenocysteine lyase
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc00730
Thiamine metabolism
gbc01100
Metabolic pathways
gbc01240
Biosynthesis of cofactors
gbc04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GbCGDNIH3_1944
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
GbCGDNIH3_1944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbc03016
]
GbCGDNIH3_1944
03029 Mitochondrial biogenesis [BR:
gbc03029
]
GbCGDNIH3_1944
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gbc02048
]
GbCGDNIH3_1944
Enzymes [BR:
gbc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
GbCGDNIH3_1944
Transfer RNA biogenesis [BR:
gbc03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
GbCGDNIH3_1944
Prokaryotic type
GbCGDNIH3_1944
Mitochondrial biogenesis [BR:
gbc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
GbCGDNIH3_1944
Prokaryotic defense system [BR:
gbc02048
]
DNA phosphothiolation system
Sulfur modification proteins
GbCGDNIH3_1944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Pyridoxal_deC
ketoacyl-synt
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHJ63828
LinkDB
All DBs
Position
complement(2193234..2194484)
Genome browser
AA seq
416 aa
AA seq
DB search
MWPACPVWRPDGLFAVPADRKRKSRFVAPLSVYLDANASEPVRPEAMAALQEVVREPGNP
SSLHRAGRGARDRQETARETLAMLYGAGPDEVIFTSGGTEADSLAVHVLGEGRRLLLGAT
EHPALLSCRPDAELIGVDREGVTDLHDLEARLAQGGEALVCLMLANNETGVIQPVAEVAA
LCRQYGALLHVDAAQAAGRMAVSMRTLDADSMALSAHKLGGVPGVGALLLRDAAHRDVRP
LMKGGGQERGWRGGTPALPAISAFAAAARAAMQTDEQGGAWGRLIEWRDRLEQAATMAGA
VVAGRGARLGRLPNTSCLILPDVAAQRQVMALDLAGIQVSAGSACSSGKVARSHVLAAMG
FGQQAGEAIRVSLPWNVTEADVQAFMDAYATMASRLRPEPSSKPFPFSVSHPISAR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttgtggcctgcctgtcctgtatggcggcctgatggcttatttgcagttccggcagaccgc
aaaaggaaatcgagattcgtggcacccctgtcagtttatctggatgcgaatgcttctgag
ccggtgcgcccggaggccatggcggcattgcaggaggtcgttcgggaaccgggcaatcca
tcctcgctgcatcgcgccgggcgtggggcgagggatcggcaggaaacggctcgtgaaact
ctggcgatgctctatggagccgggccggatgaggtgattttcacctccggcggtacggag
gcagacagtcttgccgtgcatgtactgggggaggggcgccgtttgcttcttggtgcgacg
gagcatcctgcgttgctgtcttgccgcccggatgcggaactgatcggtgtcgatcgcgaa
ggtgtgaccgatctgcatgatctggaagcacggctggcgcagggcggcgaggctctggtg
tgcctgatgctggccaataacgagacgggcgttatccagccggtggcggaggttgccgcg
ctctgccgccagtatggggcccttctgcatgtggatgcggcgcaggcggctggccggatg
gcggtgtcgatgaggacgctggatgcggacagcatggctttgtctgcccataagctggga
ggcgttccgggggtaggggcgctgctgctgcgtgatgcggcccatcgggatgtcaggccg
ctgatgaaaggcggaggtcaggaaagaggctggcgcggtggcactccggccttaccggcg
atcagcgccttcgccgccgcggctcgtgcggccatgcagacagatgagcaaggaggagcg
tggggccggctgattgaatggagagacaggctggaacaggcagccaccatggcgggggcg
gtggtggcaggtaggggggcgaggctggggcgtttgcccaacacctcatgtctgatcctg
cccgatgtggcggcgcagcgtcaggtgatggcgcttgatctggccggtatccaggtttcg
gccggatcggcatgcagttccggcaaggtagcgcgcagccatgtgctggcggcgatgggg
tttggacagcaggcgggggaggcaatccgtgtctcgttgccatggaatgtgacggaggcg
gatgtgcaagcctttatggatgcctatgccaccatggcctcccggttgaggccagaaccg
tcttccaagccctttcctttctctgtgtctcatcccatatcggcccggtga
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