Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_1263
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Entry
GbCGDNIH1_1263 CDS
T00392
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Pathway
gbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GbCGDNIH1_1263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbe03400
]
GbCGDNIH1_1263
Enzymes [BR:
gbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GbCGDNIH1_1263
DNA repair and recombination proteins [BR:
gbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GbCGDNIH1_1263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABI62161
UniProt:
Q0BSP1
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All DBs
Position
1400462..1401331
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AA seq
289 aa
AA seq
DB search
MRPPPAAAAPASRLNDHLIARSTPSFKKVALPVKIATWNVNSIRQREGHVLSWLERNQPD
ILLLQEIKCETAAFPAQAFAKLGYQAEAVGQKAYNGVAVLSRVPFEVTQRTLPGLPPDDA
QARYIEIRALNTIIGNLYLPNGNSGGEAGYAYKLGWMEHLAQHAASLLAAGEDLILAGDY
NVCPTEEDYAPGALPPEDALLRPETRARFRSLLWLGLTDAVRAMRPSGQIYTFWDYQAGA
WPRDRGLRIDHALLSSRMAERLIEALPDRMERDQPQPSDHVPVIISFEP
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgcctcctgcggctgcggcaccagcttctcggttgaatgatcatctgatagcc
agatcgacaccgtctttcaaaaaagtagcattgcccgtgaaaatcgccacctggaatgtg
aactccatcaggcagcgagagggtcatgtactgtcctggctggagcggaatcagccggac
atcctgttgttgcaggaaatcaaatgcgaaaccgctgcctttccggcacaggcttttgcc
aaactgggatatcaggccgaggcagtcgggcaaaaagcctataatggggtggctgtgctg
tcccgcgtgccgtttgaggtcacacagcgcaccctcccgggccttccccccgacgatgca
caggcgcgctatatcgagatcagagcgctgaacaccatcatcggcaatctctacctgcca
aacggcaatagtgggggggaagccggatacgcctacaagcttggctggatggagcatctt
gcacagcatgccgccagcttgctggctgccggcgaggacctcattcttgcgggagattac
aatgtctgcccgaccgaggaggattacgcccccggcgccctgcctccggaggatgccttg
ctgcggccagaaacaagggcgcgattccggtcattactctggctgggcctgaccgatgcc
gtgcgggcaatgcggccatcgggacagatttatacattctgggattatcaggcgggtgcg
tggccgcgtgaccgggggctgcgtatcgaccacgccctgttatcaagccgcatggcagag
cgactgatcgaagcccttcctgaccggatggagcgtgatcagccgcagccttcggaccat
gttccggtcataatatcgttcgagccttga
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