Citrifermentans bemidjiense: Gbem_0409
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Entry
Gbem_0409 CDS
T00749
Symbol
hemD
Name
(GenBank) uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00860
Porphyrin metabolism
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01120
Microbial metabolism in diverse environments
gbm01240
Biosynthesis of cofactors
Module
gbm_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Gbem_0409 (hemD)
Enzymes [BR:
gbm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
Gbem_0409 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Gbem_0409 (hemD)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ACH37438
UniProt:
B5EBG9
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Position
485161..486705
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AA seq
514 aa
AA seq
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MSADMKNGYVYLIGAGPGDPGLITVKGRDCLTKAQVVMYDYLANEELLRLAPKGAELIYA
GKVGGEHNREQSQINELLVQKALSGKIVARLKGGDSFIFGRGGEECEALVEAGIPFEIVP
GITAAVGATSYAGIPLTHRGVTTSVAFVTGHEKKGKASSEIDWEGLSLGSGTVVFYMGVT
NLPHIACSMMEHGRAPQTPVALIRWGTRPEQEVLVGTLANIAEKAKAAEFKAPAITVVGE
VVNLRETLRWFDNRPLFGRSVLVTRGADQAGGFTSKLEQLGARAYCCPTIEITPPTDHSA
LDEAIEGLDSFNWIIFTSYNAVKYFFARLSEHNLDTRALGRCRVCAVGPKTAAALAQYGI
RADLIPSDYKAEGVIEIFSEMDMAGQWVLFPKGDRAREVITEELGRMGAQVIAPVAYANH
TPDDIPAEALAALEDGRIDCATFTSSSTVQNLAAILGENRFLHLMQGVKVASIGPITSKT
CRDLGLEVHMEPAEYTLDALAAEMIEYFRAGELR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgatatgaagaacggatatgtctatctgatcggtgcgggtcctggagacccg
ggcctgatcacggtgaaagggcgcgattgcctgaccaaggcccaggtggtgatgtacgac
tacctggccaacgaggaactgctgcgcctcgccccgaagggggcggagctcatctacgcc
ggcaaggtcggcggcgagcacaaccgggagcagagccagatcaacgaactactggtacag
aaggcgctctcgggcaagatcgtggcgagactcaaggggggcgattccttcatcttcggg
cgcggcggcgaagaatgcgaggcgctggtcgaggccggcatccccttcgagatcgtcccc
ggcatcaccgctgcagtcggcgccaccagctatgccggtatcccccttacccatcgcggc
gtgaccacctccgtcgccttcgtcaccgggcacgagaagaaagggaaggccagttccgaa
atcgattgggaaggtctctctctgggaagcggcaccgtcgtcttctacatgggcgtcacc
aacctgccgcacatagcctgcagcatgatggagcacggccgcgcgccgcagaccccggtg
gcgctgatccgctggggcacccgccccgagcaggaagtgctggtcggaacgctggcgaac
atcgcagaaaaggcgaaggccgccgagttcaaggcgcccgccatcaccgtagtcggcgaa
gtggtcaacctcagggaaaccctgcgctggttcgacaaccgcccgctcttcgggcgctcg
gtcctggtgacccgcggcgccgaccaggcgggcgggttcacctccaagctggagcagctc
ggcgccagggcttactgctgcccgaccatcgaaatcaccccgcccaccgatcattccgca
ctcgacgaggcgatcgaggggctggacagcttcaactggatcatcttcacctcgtacaac
gccgtgaagtacttcttcgccagactctccgagcacaacctcgacacccgtgccctcggc
cgctgccgcgtctgcgccgtcggtcccaagaccgccgcggcgctggctcaatacggcatt
cgggccgatctgatcccttccgattacaaggccgagggggtcatcgaaatcttttccgag
atggacatggcaggacaatgggtgcttttccccaaaggcgaccgtgcccgcgaagtcatc
accgaggagttggggcggatgggagcccaggtcatcgcacctgtcgcctatgcgaaccac
acccctgacgatatcccagccgaggcgctcgccgccctcgaggacggtcgcatcgactgc
gccaccttcacctcctcctccaccgtgcagaacttggccgccatcctgggcgagaaccgg
ttcctgcatctgatgcaaggagtaaaggtcgcctccatcggccccatcacctccaagacc
tgccgggatctggggcttgaggtgcacatggagcccgccgagtacacgctcgacgcgctg
gccgcggagatgatcgaatattttcgcgcaggggaattacggtaa
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