Citrifermentans bemidjiense: Gbem_1988
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Entry
Gbem_1988 CDS
T00749
Name
(GenBank) sigma-54-dependent transcriptional response regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gbm02022
]
Gbem_1988
Two-component system [BR:
gbm02022
]
NtrC family
Unclassified
Gbem_1988
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA
AAA_3
HTH_17
HTH_1
HTH_7
HTH_23
HTH_29
RWP-RK
HTH_28
HTH_20
VpsR
HTH_50
Xre-like-HTH
NUMOD1
HTH_Tnp_1
HTH_IclR
DUF5315
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACH39001
UniProt:
B5EBX7
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Position
2292149..2293678
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AA seq
509 aa
AA seq
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MTDSSTRILIIDDERDVCTFFSRLLSRKGYQVVTAASEPEALSALEAAQFSVALVDLKLP
DTDGITLLEIIKSRQPACEVIIMTGYSTVKTAVAAMQLGAYEYLEKPFDDIDQIEQLVGR
AAGSGASLLRGDNSHDEWAEVAQGVGFRVGSSPSMKRMVSLAYKVAGKDISVLIQGKTGT
GKEVLARFIHAASCRAGQPFIPVNCGALPENLLEGELFGHEKGAFTGANQTRRGIFELAN
NGTLLLDEIGDATPQIQVKLLRVLETGEFMRVGGERPIRTDVRVIAATNVDLEQAIAEKS
FREDLFYRLNVVRLEIPSLSARSEDIPLLAEHFVHQINRELKLAAGTLRMLQGYAWPGNI
RELANVMRRAVVICNGDTILPEHLGGTFLAGPTAPERGSAAKTIQQPDRSRLQATLLEHC
DSAEELERLDAEELNRLLDSLRQAQSNLLGVMRKKKIVPALHALKDSEAETIKEALAQYD
GNITEAARALGIARNTLYRKIKELGLPGR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcatctactagaatacttatcatcgacgacgagagggatgtctgcaccttt
ttcagccggcttttgtcgcgcaaggggtaccaggtggtcaccgccgccagcgagcccgag
gcgctctccgcgttggaggcggcgcagttcagcgtggcgctcgtagacctgaagctcccc
gacaccgacggcatcaccctgctggagatcatcaagtcgcggcagcccgcctgcgaggtc
atcatcatgaccgggtactccaccgtcaagacggcggtcgccgccatgcagctcggtgcc
tacgaatacctggaaaagcccttcgacgacatcgaccagatcgagcagttggtcggcagg
gccgctggttcaggcgcaagcctcctgagaggggacaactcccacgacgagtgggccgaa
gtggcccagggggtaggtttcagggtcgggagctctccgtccatgaagaggatggtctca
ctcgcctacaaggtcgccggcaaggacatcagcgtcctgatccaggggaagaccggcacc
gggaaagaggtgctggcccgcttcatccacgccgcctcctgccgcgccgggcagcccttc
atcccggtcaactgcggcgcgctacccgagaacctcctggagggcgaactcttcgggcac
gaaaagggcgccttcaccggcgccaaccagacccgccgcggcatcttcgagctcgccaac
aacgggacgctcctcttggacgagatcggggacgcgacaccgcagatccaggtcaaactt
ttgcgcgtcttggaaaccggcgagttcatgagggtagggggggagcgccccataaggacc
gacgtcagggtgatagccgcgaccaacgtggacctggagcaggccattgccgagaagagc
ttccgcgaggacctcttttaccgcctgaacgtggtgcggctggagataccgtctcttagc
gcccgttccgaggacatcccgcttttggccgagcatttcgtgcaccagataaatcgcgaa
ctgaagcttgccgcgggaaccttgcgcatgctgcaggggtacgcctggcctgggaacatc
cgcgaactggctaacgtgatgaggcgggccgtggtgatctgcaacggcgacaccattctt
cccgagcacctgggtgggacctttctcgcgggacccacggcaccggagcgggggagtgcg
gcgaaaacaatccagcaaccggaccgcagcaggctgcaggctacactcctggagcattgt
gacagcgctgaagagctggagcggctggatgccgaagagctgaaccggcttttggattcg
ttgcgccaggcgcagtcgaacctcctcggcgttatgcgcaaaaagaagatcgttccggcc
ctgcacgcgctgaaggattccgaagccgagaccatcaaggaagcgctggcgcagtacgac
ggcaacatcaccgaggccgcgagggcgctggggatagcccgcaacaccctctacagaaag
atcaaggagctggggctgccgggaaggtag
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