Geobacter benzoatilyticus: JZM60_05705
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Entry
JZM60_05705 CDS
T07995
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbz
Geobacter benzoatilyticus
Pathway
gbz03420
Nucleotide excision repair
gbz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JZM60_05705
03430 Mismatch repair
JZM60_05705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbz03400
]
JZM60_05705
Enzymes [BR:
gbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JZM60_05705
DNA repair and recombination proteins [BR:
gbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JZM60_05705
MMR (mismatch excision repair)
Other MMR factors
JZM60_05705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
QSV46764
LinkDB
All DBs
Position
1198419..1200647
Genome browser
AA seq
742 aa
AA seq
DB search
MDLLKNLNPPQKEAVLHGEGPLLVLAGAGSGKTRVIVHRIAHLIREGGVPPWQILAVTFT
NKAAGEMRERVERLVGSGEAPLIATFHSTCARFLRRDIHNLGYDSSFAIYDDKDAEKLLK
EVIAGLGLDEKRFPARSFAAAIDDCKNRGIPPEEIPTGDYTGEMLARVYGAYQERLKKCN
ALDFGDLLMLTVRLFEEHPEVLARYRDKFRWILVDEYQDTNPIQYRLVRLLAGERRNLCV
VGDDDQSIYRWRGADIRNILDFEKDFPGVVTVKLEQNYRSTRNILAAAGAVVAKNRGRKA
KTLWSENPAGESIVYRRLADEREEARFVCREIEKHVRRGGDLRGVAVFYRTNAQSRVIED
AMVADGIPYHMVGGMRFYERMEVKDILAYLKVLVNPADEVSLKRIINVPARGIGHATVEK
VAELALRKGIILYDAFSEASTGGLLTTGPRGKIAGFMTLMERFAGLAGTVPLSELASRII
EETGYAAKLKEERTDEAQDRLDNLQELCSAMEEFERSSDEKTLAAFLEQVALVSDLERGE
AKRESATLMTLHAAKGLEFPMVFMIGMEEKLFPHVRSLDDPEAMEEERRLCYVGMTRARE
RLVLTNARRRRLFGQDQVNMPSRFIADVPRDLLDLEDEYQSSFGFGAGRGMEREVQASEP
ARHNLASIFEIEIEPDFDDIEVIPDEPEDGGIWLGMKVRHGKFGVGVIRKIEGKGDDQKV
IVWFNSVGPKKLLVRFAGLERV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggacctcctgaaaaacctcaacccgccccagaaggaggcggttctccacggcgagggg
ccgctcctggtcctggccggcgccgggtcggggaagacccgggtcatcgttcaccgtatt
gcccacctgatccgcgaggggggcgtccccccgtggcagatcctggcggtcaccttcacc
aacaaggctgccggcgagatgcgggagcgggtggaacgcctcgtggggagcggcgaggcc
cccctcatcgccaccttccactccacctgcgcccggttcctgcgccgcgacatccataac
ctggggtatgactcctcctttgccatctacgacgacaaggacgcggaaaagctcctgaag
gaggtgattgccggccttggcctcgacgagaagcgctttccggcccgctcctttgccgcc
gccatcgacgactgcaagaaccgcggcatccccccggaggagattcccaccggcgactac
accggcgagatgctggcccgggtctacggcgcctaccaggaacggctgaagaagtgcaac
gccctggacttcggcgacctcctcatgctgactgtccgcctcttcgaagagcaccccgag
gtgctggcccgctaccgggacaagtttcgctggatcctcgtggacgagtaccaggacacg
aacccgatccagtaccggctcgtgcggcttctggccggggagcggcgcaacctctgcgtg
gtgggggacgacgaccagtccatctaccgctggcggggggccgatatccggaacatcctc
gatttcgagaaggatttccccggcgtggtcaccgtgaagctggagcagaactaccgctca
acccggaacatcctggccgcggccggggccgtggtggccaaaaaccgggggcgcaaggcc
aagacactctggagcgagaacccggccggggagagcattgtctatcggcggctcgccgac
gagcgggaggaggcccgcttcgtctgccgtgagatcgaaaagcacgtgcggcggggaggc
gacctgcggggcgtggcggtcttttaccggaccaacgcccagtcccgggtcatcgaggac
gccatggtggccgacgggatcccctatcacatggtgggggggatgcggttctacgagcgg
atggaagtgaaggatatcctcgcctatctgaaggttcttgtgaacccggccgacgaggtc
tccctgaagcggatcatcaacgtcccggcccgggggatcggccacgctaccgtggaaaag
gtggcggagctggcgctccgcaagggaatcatactctacgacgccttcagcgaggcgtcc
accggcgggcttcttaccaccggaccccgggggaagatcgccggcttcatgaccctcatg
gagcgcttcgccggtcttgccggtacggtccctctctcggagctggcctcccgcatcatc
gaagaaaccggctacgccgccaagctcaaggaggagcggaccgacgaggcccaggatcgc
ctcgacaaccttcaggaactctgctccgccatggaggagttcgagcggtcaagcgacgag
aagaccctggccgccttcctggagcaggtggccctcgtgtcggacctggagcggggcgag
gccaagcgggagtcggccaccctcatgaccctccacgcggccaaggggctggaattcccg
atggtcttcatgatcggcatggaagagaagctcttcccccacgtccgctccctggacgac
ccggaggccatggaggaggaacggcgtctctgctacgtggggatgacccgggcgagggag
cggctcgtcctcaccaacgcccgccgccggcgcctctttggccaggatcaggttaatatg
ccgtcccgcttcatcgccgacgttcccagggacctcctggacctggaggacgagtaccag
tcctccttcggcttcggcgcaggtcgggggatggagcgggaagtgcaggcctctgaaccg
gcgcgccacaacctggcgagcatcttcgaaatagagattgagcccgacttcgacgacatc
gaggtgatccccgacgagcccgaagacggcggcatctggctcggcatgaaggtgcgccac
ggcaagttcggcgtgggcgtcatccgcaagatcgaggggaaaggtgacgaccagaaggtg
atcgtctggttcaactcggtggggccgaagaagctgctggtgaggtttgcggggctggag
cgggtctga
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