Gymnogyps californianus (California condor): 127014464
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Entry
127014464 CDS
T08687
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127014464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gcl03036
]
127014464
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127014464
Chromatin remodeling factors
NuRD complex
127014464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
HDA2-3
ResIII
DEAD
PHD_2
Motif
Other DBs
NCBI-GeneID:
127014464
NCBI-ProteinID:
XP_050749826
LinkDB
All DBs
Position
1:complement(132202645..132224564)
Genome browser
AA seq
1931 aa
AA seq
DB search
MASGIGSPSPCSGGSDDDEMEILLNNAIPQHPEPEEEPEEELLSEADTPKIKKKKKPKKL
KEPKVPKLSKRQKKELGDSSGEGNEFVEEEEEVLRSDSEGSDYTPGKKKKKKLGPKKEKK
NKAKRKEEEEEEEEDDDSKEPKSSAQLLEDWGMEDIDHIFTEEDYRTLTNYKAFSQFVRP
LIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTNVDAV
LPQPPVDVPLRKAKTKEGKGPNARRKPKASPRIPDIKKPKTKKVAPLKIKLGGFGSKRKR
SSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLKAGKKKKKGEEDSTVAVDGYE
TDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKED
NSEGEEILEDVVGDAEEEDDHHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNG
EWLCPRCTCPALKGKVQKILIWKWGQPPVGPPPPRPPDADPNAPPPKPLEGRPERQFFVK
WQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGEEEKSRKRKNKDPKYA
EMEERFYRYGIKPEWMMIHRILNHSVDKKGNVHYLIKWRDLPYDQASWESEDVDIQDYDL
YKQAYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQPEYLDVTGGTL
HPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLST
IINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFH
VLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQ
NNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNM
PSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFP
VAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFL
EHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDS
DWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSK
TGSMSKQELDDILKFGTEELFKDEATEGGDNKEGEDSSVIHYDDKAIERLLDRNQDETED
TELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDGSQEDRGSRAVFLSDWQDDQSDNQSDYSVASEEGDEDFDE
RSEAAFLSSAARRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGM
PPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVL
TRIGVMSLIRKKVQEFEHVNGRWSMPELAEIEENKKLSQPSSPSPKTPTPSTPGDTQPNT
PAPVPPAEEGVKVEEGASAKEQGESSEPEKELSAAATETEVPMEQCAQPVETPPQEAKSP
VNPTEADEKKVEEPEVKERPDEPMEVESKADVEKVEDRAPIENPPEPPIITLDEKDEKKD
DDKRDVVMLQNGEMLKESVDERHKKAVKQRFMFNIADGGFTELHSLWQNEERAATVTKKT
YEIWHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARR
FKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKP
ANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRSSEPPP
PPPPQQVAQQQ
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggcattggatctccgtcaccgtgctcagggggcagcgatgatgatgagatg
gagatcctgttgaacaatgctatcccccagcatccagagcctgaagaagagccagaagaa
gagcttctctctgaggctgacacccccaaaatcaagaagaagaagaagcccaagaaacta
aaggaacccaaagtacccaagctcagcaagcgtcagaagaaggagctgggggacagctct
ggtgaggggaatgagtttgtggaggaagaagaggaggttctgcgctctgacagtgagggc
agtgactacactcctgggaagaagaaaaagaagaaattagggcccaaaaaggaaaagaaa
aacaaagccaagcgcaaggaggaggaggaagaagaggaagaagatgatgactcaaaggag
ccgaagtcatctgctcagctcctggaggactggggcatggaggatattgatcatatcttc
accgaggaggattaccgcactctcaccaactacaaagctttcagccagtttgtcaggcca
cttattgcagccaagaaccctaaaatagcagtgtcgaagatgatgatggtactgggagcc
aaatggagggagtttagcacaaacaaccccttcaagggaagttcaggtgcatctgtggca
gctgctgcagctgcagctgttgcagtagtggagagtatggtgacaaatgtggatgctgtc
ctgccgcagccccctgtagatgtgccactcaggaaagccaagacaaaggagggcaaagga
cccaatgcccggcggaagccaaaggccagtcctcgtattcctgatatcaagaaacctaaa
acaaagaaagtggcacctttgaaaatcaaactgggaggatttggttccaagcgtaaaaga
tcatcaagtgaagatgatgatctggatgtggagtcagactttgatgatgccagcatcaac
agctactctgtttcagatggatctacaagccgtagtagccgtagtcgcaaaaaactcaaa
gctgggaaaaagaaaaagaaaggtgaggaggactccacagtggctgtggatggctatgag
actgatcaccaggactactgtgaggtgtgccagcagggaggagaaattatactgtgtgat
acctgccctcgtgcctaccacatggtttgcctggacccagacatggagaaagccccagag
ggcaaatggagctgcccacactgtgaaaaagagggcattcagtgggaagcaaaggaggat
aactctgaaggtgaggaaatcctggaggatgttgtaggggatgctgaggaagaggatgac
caccatatggagttctgtagagtctgcaaggatggaggagagctgctgtgctgtgatgcc
tgtccttcatcctatcacatccactgtctgaatcccccattgccagagattcccaacgga
gagtggctgtgtcctcgttgcacttgcccagctttaaaaggaaaggtgcagaagatcttg
atctggaaatggggtcagcccccggttggccctcccccaccacgtccacctgatgcagac
cctaatgctcctccccctaagcctctggagggtcggcctgaaaggcagttctttgtcaaa
tggcagggcatgtcctactggcactgttcttgggtgtcagagttgcagctggagctgcac
tgccaggtcatgtttcgtaactaccaacgcaaaaatgatatggatgagccaccctcaggg
gactttggaggggaagaggagaaaagccggaagagaaaaaacaaggaccccaaatatgct
gagatggaggagcgcttctatcgatacgggatcaagcctgagtggatgatgatccacagg
atccttaatcatagtgtggataagaaggggaatgtccactatttgattaaatggagagac
ttaccctatgaccaggcatcctgggaaagcgaagatgtggatatccaagattatgacctc
tacaagcaagcctactggaatcacagggagctgatgagaggtgaagagggcaggcctggt
aagaagttaaagaaagtgaagatgcggaaactggaaaggccccctgagactcccacagta
gatccaacagtgaaatatgaccggcaaccggagtacctcgatgtaacaggggggaccttg
catccctaccaactggaaggactgaactggctgcgcttctcttgggcccagggcacagat
acaatcttggctgatgaaatgggtctgggaaagactgtgcagacagctgtgttcctgtat
tccttatacaaagagggccactcaaagggtcccttcttggtgagtgccccgctgtccaca
atcatcaactgggaacgagaatttgagatgtgggccccagatatgtatgtagtgacctac
gttggggacaaagacagccgggccatcatccgtgagaatgagttcacttttgaggataat
gccatacgtggaggcaaaaaagcatccagaatgaagaaggaggctgctgtgaagttccac
gtgcttctcacctcctatgaactgatcacaattgatatggccatactaggctctattgac
tgggcctgtctcattgtggatgaagctcacagactgaagaataatcagtctaagttcttc
cgtgtgctgaatggttactccctccagcacaagctgctgcttacaggaactcccctgcag
aacaatctggaagaactgttccacctgttgaacttcctgacgccagagagattccataac
ttggagggcttcctagaagagtttgcagatattgccaaggaagatcagatcaagaagctg
catgacatgctgggcccacacatgctgaggcgtctcaaagctgatgttttcaagaacatg
ccatctaagactgaactcattgtcagagtggagttgagccccatgcagaagaaatattat
aaatatattttgacaagaaactttgaggcactgaatgcacggggtggtggtaaccaagtc
tccttgctcaatgttgttatggatctgaagaagtgctgtaaccacccctacctctttcct
gtggctgctatggaagctccaaaaatgccaaatggcatgtatgatggtagtgctcttatt
cgagcctctggaaagctgttgctgctccagaagatgttaaagaaccttaaggaaggaggt
cacagggtgctcatattctctcagatgactaaaatgttggaccttctagaagactttttg
gaacacgaagggtacaaatacgagcggattgatggaggaatcacagggaacatgcgtcag
gaggctattgatcgcttcaatgctcctggtgcccagcagttctgctttctgctttcaact
cgagctgggggtcttggtattaacttggccacagcagatactgtgattatctatgattca
gactggaacccccacaatgatattcaggccttcagtcgtgcacacagaattggacagaac
aagaaagtgatgatataccgctttgtgacaagggcctcagtggaggagcgtatcactcag
gtggccaagaagaaaatgatgctaactcatctggtagtgagaccagggttgggctccaag
acaggctccatgtccaaacaggaacttgatgacattctcaaatttggcactgaagagctc
ttcaaggatgaggctactgaggggggggataacaaagaaggtgaggacagcagtgtcatc
cactacgatgacaaagcaattgagcgtctgttggatcggaaccaggatgaaacagaagat
acagaacttcagggcatgaatgagtatctcagctccttcaaggtggcccagtatgtggtt
cgtgaagaggagatgggggaggaagaggaggttgaacgggagatcattaagcaggaggag
tcagtggatcctgattactgggagaaactgctgcgtcaccattatgaacagcaacaggag
gatctggccaggaatctgggcaagggcaaacgtattcgcaagcaagttaactacaatgat
ggctcgcaggaggatagaggctcacgtgctgtttttctttcagactggcaggatgaccag
tcagataatcagtcagactattcagttgcttctgaagaaggagatgaggactttgatgag
aggtctgaagctgcatttctctcttcagcagctcgtcggcctagccgcaaaggcctgaga
aatgataaggataagcctctgcctcccttacttgcccgtgtgggagggaacattgaagtc
ttgggtttcaatgcccgccagcggaaagccttcctcaatgctatcatgcgctatggaatg
ccacctcaggatgccttcaccacccagtggcttgttcgggacctccgtggcaagtcagag
aaagagttcaaggcctatgtctcactgttcatgcgccatttatgtgaacctggagctgat
ggtgcagagacctttgcagatggggtcccacgggaaggtctttctcgacagcatgtcctt
actcgcattggggtcatgtcacttatacgcaaaaaggtgcaggaatttgagcatgtgaat
ggccgttggagtatgccagaactggcagagatagaggagaacaagaaactttcacagcca
agctcgccctctcccaaaactccaactccttcgacaccaggggatacgcagccaaatacg
cctgcccctgtccctccagctgaagaaggagtaaaagtagaagaaggagccagtgctaag
gagcaaggagagtcatctgaaccagagaaagagctcagcgctgctgctactgaaacagag
gtccctatggagcagtgtgcacagcctgtggagacaccgccacaggaagcaaaatcccca
gtgaaccccacagaagcagatgaaaaaaaagtagaggaaccggaggtgaaggaaagacca
gatgagccaatggaagtagaaagcaaagctgatgtggagaaagtggaagacagagcacct
attgagaatccccctgaacctcctataatcactctggatgagaaagatgagaaaaaggat
gatgataagagagatgtggtgatgctgcagaatggagagatgctgaaagagtcagtagat
gaaaggcacaagaaggcagtaaagcagcgcttcatgttcaacatagcagatggtggcttc
actgaactacactccctgtggcagaatgaagagcgggctgcaactgtcacaaagaagacc
tatgagatctggcatcggcgtcatgactactggctccttgctgggattatcaatcatggc
tatgcccgttggcaggatattcagaatgatccacgttacgccatcctcaatgaacccttc
aagggtgagatgaacaggggtaacttcctggaaataaagaataagttcttggcaagaaga
tttaagctcctggagcaagcgctggtgatcgaggagcagttgcggcgagctgcctatctg
aacatgtcagaagacccatctcatccatccatggcgctgaacacccgtttcgcagaggtg
gaatgcctggctgagagccaccagcacctatccaaggagtcaatggccgggaataaacca
gccaacgctgtgctgcacaaagttctgaagcagctggaggagcttttgagtgacatgaag
gcggatgtgactcgtttgcctgccaccattgcccgtatcccgcctgtggcagtgcgcctc
cagatgtctgagcgcaacatcctcagccggctggccaaccgcagcagtgagccccctccg
ccgccgcctccccaacaagtggcccagcagcagtga
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integrated database retrieval system
