KEGG   Gymnogyps californianus (California condor): 127014687
Entry
127014687         CDS       T08687                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gcl  Gymnogyps californianus (California condor)
Pathway
gcl03082  ATP-dependent chromatin remodeling
gcl03083  Polycomb repressive complex
gcl04110  Cell cycle
gcl04330  Notch signaling pathway
gcl04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:gcl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127014687
   03083 Polycomb repressive complex
    127014687
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    127014687
   04350 TGF-beta signaling pathway
    127014687
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    127014687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gcl03036]
    127014687
Enzymes [BR:gcl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     127014687
Chromosome and associated proteins [BR:gcl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     127014687
   HDAC complexes
    Sin3A-HDAC complex
     127014687
    BRAF-HDAC complex
     127014687
    REST complex
     127014687
    SHIP complex
     127014687
    MiDAC complex
     127014687
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     127014687
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127014687
  Chromatin remodeling factors
   NuRD complex
    127014687
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 127014687
NCBI-ProteinID: XP_050750159
LinkDB
Position
3:74473738..74498038
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDAKGA
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactattatgacggtgatatt
ggaaactattactatggacaagggcatccaatgaaacctcataggatccgaatgacccac
aacttgctgctaaattatggcttatacagaaaaatggaaatttatcgaccccacaaagct
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcaaatgcagagatttaatgttggagaagat
tgtcctgtatttgatggcctgtttgagttttgtcagctgtcaactggaggctctgttgct
ggggcggtaaaattgaacagacaacagacagacatggctgttaattgggctggaggactt
caccatgccaagaaatcagaggcatctggtttctgttatgtcaatgatatcgtgcttgcc
atccttgagttactgaagtatcaccaaagagtcttgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccgggcacaggggaccttagggacattggtgctggaaaaggc
aaatactatgctgtcaactttccaatgagggatggtatagatgatgaatcatatggacag
atattcaaaccaattatatccaaagtaatggagatgtaccagcccagtgctgtggtatta
cagtgtggagcagattcactgtctggtgacaggctgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagttgtaaagacttttaacttgccattgctgatgttagga
ggaggaggatatacgattcgtaatgttgctcgatgctggacgtatgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccatacaatgactactttgagtatttcggacca
gactttaagcttcatattagtccttcaaatatgactaatcagaatacaccagaatatatg
gagaagatcaagcaacgcttatttgaaaatttgcgcatgttacctcatgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagacagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgataagcgcatagcctgtgatgaagaa
ttttcagattctgaagatgaaggggaaggtggacgacgaaatgttgcagatcataagaaa
ggagcaaagaaagccaggatagaggaagacaaaaaagagacggaggacaaaaaagcagat
gttaaggaggaggataaatccaaggacagcagtggtgaaaagacagatgccaaaggagcg
aaatcagaacagctcagcaatccttga

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