Gymnogyps californianus (California condor): 127014687
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Entry
127014687 CDS
T08687
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03082
ATP-dependent chromatin remodeling
gcl03083
Polycomb repressive complex
gcl04110
Cell cycle
gcl04330
Notch signaling pathway
gcl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127014687
03083 Polycomb repressive complex
127014687
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127014687
04350 TGF-beta signaling pathway
127014687
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127014687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gcl03036
]
127014687
Enzymes [BR:
gcl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127014687
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
127014687
HDAC complexes
Sin3A-HDAC complex
127014687
BRAF-HDAC complex
127014687
REST complex
127014687
SHIP complex
127014687
MiDAC complex
127014687
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
127014687
Heterochromatin formation proteins
Other heterochromatin formation proteins
127014687
Chromatin remodeling factors
NuRD complex
127014687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
127014687
NCBI-ProteinID:
XP_050750159
LinkDB
All DBs
Position
3:74473738..74498038
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDAKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactattatgacggtgatatt
ggaaactattactatggacaagggcatccaatgaaacctcataggatccgaatgacccac
aacttgctgctaaattatggcttatacagaaaaatggaaatttatcgaccccacaaagct
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcaaatgcagagatttaatgttggagaagat
tgtcctgtatttgatggcctgtttgagttttgtcagctgtcaactggaggctctgttgct
ggggcggtaaaattgaacagacaacagacagacatggctgttaattgggctggaggactt
caccatgccaagaaatcagaggcatctggtttctgttatgtcaatgatatcgtgcttgcc
atccttgagttactgaagtatcaccaaagagtcttgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtatggtgaatattttccgggcacaggggaccttagggacattggtgctggaaaaggc
aaatactatgctgtcaactttccaatgagggatggtatagatgatgaatcatatggacag
atattcaaaccaattatatccaaagtaatggagatgtaccagcccagtgctgtggtatta
cagtgtggagcagattcactgtctggtgacaggctgggatgctttaatcttactgttaaa
ggtcatgctaaatgtgtggaagttgtaaagacttttaacttgccattgctgatgttagga
ggaggaggatatacgattcgtaatgttgctcgatgctggacgtatgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccatacaatgactactttgagtatttcggacca
gactttaagcttcatattagtccttcaaatatgactaatcagaatacaccagaatatatg
gagaagatcaagcaacgcttatttgaaaatttgcgcatgttacctcatgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagacagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgataagcgcatagcctgtgatgaagaa
ttttcagattctgaagatgaaggggaaggtggacgacgaaatgttgcagatcataagaaa
ggagcaaagaaagccaggatagaggaagacaaaaaagagacggaggacaaaaaagcagat
gttaaggaggaggataaatccaaggacagcagtggtgaaaagacagatgccaaaggagcg
aaatcagaacagctcagcaatccttga
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