Gymnogyps californianus (California condor): 127017346
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Entry
127017346 CDS
T08687
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gcl01002
]
127017346
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127017346
Enzymes [BR:
gcl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127017346
Peptidases and inhibitors [BR:
gcl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127017346
Ubiquitin system [BR:
gcl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127017346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
127017346
NCBI-ProteinID:
XP_050754310
LinkDB
All DBs
Position
5:complement(11355686..11414070)
Genome browser
AA seq
1349 aa
AA seq
DB search
MKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERVTLNLPASTPLKRLFEDVASKVGYVNG
TFDLMWGNGDNVTDTTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQPHIMPEESGTTD
DSAQDRFIGPLPREGSVGCTNDYVSQSYSYSSVLSKSETGYVGLVNQAMTCYLNSLLQTL
FMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSE
AWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGYEGWRIDTYLD
IPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLL
TLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESCTDSGAENEGSCH
SDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMVHSGSAAGGHYYA
CIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDP
TRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCMHPTKQIMMENKL
EVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLERSYEGEEDTPMGLLLGG
VKSTYMFDLLLETRKPDQIFQCYKPGEVMVKVHVVDLKTESVAPPISVRAYLNQTVSEFK
QLISKATHLPAETMRVVLERCYNDLRLLNVSSKTLKAEGFFRSNKVFIESSESLDRHVAY
TDSHLWKLLDRHANTIRLYVSLPEQSPGSQFRRAVYQKSSGDSGNLDEACERVKGPVGNM
KSVEAILEESTEKLKSLSLQQQQEGDNGDSSKSTEASDFENIESPLNEIDSSASAENREL
ENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNVDNAPLPLANGLD
SHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYFKSEPYTADEGSG
EGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEFESVRLNETLSSFSD
DNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTVRQSKEELLPQLREQ
CGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEILDGVEKMKSMSQLA
VLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEFAKGRGTFPCDISIL
EIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNELMKKESSRLQKT
GHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaattttcacaggtggaaagcgctgctgaggaacccagggtgttgtgtata
atacaagataccacaaattccaaaacagtgaacgagcgtgttaccttgaacctgcccgct
tccacaccacttaaaaggctgtttgaagatgtggcttcaaaagtgggctacgtgaatgga
acttttgatttaatgtggggaaatggagataatgtaactgatacgactccaatagatcag
aacagtgacaaaactattcttgatgctggttttgagccagggaagaagaactttctgcat
ttgacagacaaagatggtgagcagcctcatataatgccggaggagtcaggtacaacagac
gacagtgcacaagacagatttataggccctcttcctagagaaggctctgttggctgtacc
aatgactatgtcagtcaaagctattcttattcttcagtcctgagcaaatcggagacaggt
tatgtggggctagtaaatcaagcaatgacttgctacttgaacagccttctacaaacactt
ttcatgactcctgaatttagaaatgcattatataaatgggaatttgaagaatctgaagag
gatcctgtgacaagtatcccctaccagcttcaaagactgtttgttttactgcagaccagc
aaaaaaagagcaattgaaacaacagatgttacacggagttttggatgggatagtagtgag
gcatggcagcaacatgatgtacaggagctttgtagagttatgtttgatgctttggagcag
aagtggaagcaaacagaacaggctgatcttataaatcaactgtatcaaggcaaactgaag
gactatgtaagatgtctagaatgtggctatgaaggctggagaatcgacacctacctggat
attcctttggtcatccggccgtatggctccaaccaggcatttgctagcgtggaagaagca
ctgcatgctttcattcagcctgagattcttgatggccccaatcagtatttttgtgaacga
tgtaagaagaaatgtgatgcaaggaagggtctgcggttcttgcattttccatatctgctg
acattacagctgaagagatttgacttcgattataccactatgcacagaattaaactcaat
gatcgtatgacttttcctgaggagttagacatgagtgtcttcattgatgttgaagatgag
aagtctcctcagactgagagttgcactgatagtggagctgaaaatgaaggcagttgtcac
agtgatcagatgagcaatgatttttcaaatgatgatggagttgatgaaggaatctgcctt
gaaagcaatagtgcagcagaaagaatttctaaagctggcagtgaaaagagttctttactg
tatgagctcttttctgttatggttcattctggaagtgctgctggtggccattattatgcc
tgtataaaatcttttagtgatgaccagtggtacagctttaatgatcagcatgttagcaag
ataactcaggaagatattaagaaaacatatggtggatcttctggaagcagaggctattat
tccagtgcttttgctagctccacaaacgcatacatgctgatatatagactgaaggatcca
acgagaaatgcaaagtttcttgaggcacatgagtatccagagcatattaaacagttggta
cagaaagagagagaattggaagaacaagaaaagaggcaacgtgaaattgagcgcaacact
tgcaagattaaattgttctgcatgcatcctacaaaacaaataatgatggagaacaaatta
gaggttcataaggacaggacactgaaggaagctgtggaaatagcttacaagctaatggat
ttagaagaggccgttcctttggattgctgtcgtcttgtcaaatacgatgagtttcatgac
tacttggaacgatcttatgaaggagaagaggatacaccaatgggtttattacttggaggt
gtcaaatcaacgtacatgtttgacttactgttggaaacaagaaaacctgaccagattttc
cagtgctataaacctggtgaggtcatggtaaaggttcacgtagttgacctaaagactgaa
tctgttgctcctccaataagtgtacgagcttatttaaatcaaacagtttcagaatttaaa
cagctaatttcaaaggctacacacctgcctgctgaaaccatgcgggtagtattagaacgt
tgctacaatgacttgcgtcttctgaatgtttccagcaaaacactgaaagctgaaggcttt
ttcagaagcaacaaggtatttattgaaagctcagagtctttagatcgtcatgtggcatat
acagattctcatttatggaaacttttggatcgtcatgcaaatacaatcagactgtatgtt
tcattaccagagcaatcacctggatctcaatttagacgagcagtttatcagaagtctagt
ggagattcaggcaacttggatgaagcctgtgaaagagtaaaaggacctgtaggtaatatg
aaatctgtagaggcaattctggaagaaagcactgaaaagcttaaaagcttgtccttgcag
cagcagcaggagggggataatggagacagcagcaaaagcacagaagccagtgattttgaa
aacattgaatcacctttaaatgaaatagactcttcagcatcagcagaaaacagagaactt
gaaaaccaaattcagatttccgatccagaaaatctccagtctgaggaacggtcagattca
gatgtaaataacgacaggagtacaagttcagtggacagtgatatcctcagctccagtcat
agcagtgatactttatgcaacgtggacaatgccccacttcccttggctaatggacttgat
tctcatagtatcacaagtagtaggcgatcaaaagcaaatcaggggaagaaagaaacgtgg
gacacagcagaagaagattctggaacagacagtgaatacgatgaaagtggcaagagcaga
ggagaagcacaatatatgtactttaagtcagaaccctacactgcagatgaaggttcggga
gaagggcaaaaatggctgatggtgcatgttgataaaagaattacactgtctgccttcaag
caacatttggagccttttgttggagttccatcttctcacttcaaagtctttagagtctac
gccagcaatcaagagtttgagagtgttcggctgaatgagacactttcgtcattttctgat
gacaataagataactattagacttggaagagcccttaagaagggtgaatacagagtcaaa
gtgtatcaacttttggtaaatgagccagagccgtgcaagtttcttctagatgcagttttt
gctaaaggaatgactgtccgacagtcaaaagaggagctgcttccccagcttcgagaacaa
tgtggcctagacttgacaattgacaggtttcgcctgcgaaagaaaacctggaagaaccca
ggcactgtgtttctggattatcatatctatgaagaagatatcaatatttcaagcaattgg
gaggtcttcttagaaatacttgatggagtagaaaagatgaaatccatgtcacaacttgct
gttttatcgagacgatggaggccatcagagatgaaactagattctttccaggaagtagta
ctagaaagcagcagtgttgaagaattaaaagagaagctgagtgaaataagtggaataccc
ttagaaaacatagaatttgctaagggtagaggaacgtttccatgtgacatttccatacta
gagattcaccaagacttggactggaatcctaaagtatctacattgaatgtctggcctctg
tacatttgtgatgatggtgcagtaatattttatagggataagactgaagaattaatggaa
ttaacagatgagcagagaaatgaactgatgaaaaaagaaagcagcagactccagaaaact
ggacaccgggtaacctactctcctcgtaaagaaaaagcactaaaaatttatctggatgga
gcaccaaataaagatttgactcaagactga
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integrated database retrieval system
