Gymnogyps californianus (California condor): 127020935
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Entry
127020935 CDS
T08687
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04217
Necroptosis
gcl04622
RIG-I-like receptor signaling pathway
gcl04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127020935
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127020935
04625 C-type lectin receptor signaling pathway
127020935
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gcl01002
]
127020935
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127020935
Enzymes [BR:
gcl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127020935
Peptidases and inhibitors [BR:
gcl01002
]
Cysteine peptidases
Family C67
127020935
Ubiquitin system [BR:
gcl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127020935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
127020935
NCBI-ProteinID:
XP_050759724
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All DBs
Position
12:16700219..16723485
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AA seq
954 aa
AA seq
DB search
MNSGLWSQEKASSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVGHSR
NIPCKGKKLQIGLKILEQPHAVLFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
TKGIQIDIGSPVRVQLRSGDDKFPGVVRFRGPLMQERSLTGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPETVSQDRRPPKLAYTSRGGGDKSLFNHSKPKATGSTSEPGNRNRSEVFYTLNGSS
VDSQPQMKTKPPWYIDEVAEDPAKSLTDSSPGFGHSSPPLQPPSTNSVSTENRFHSLPFS
LTKMSSTNGTIGHSPLSLSVQSVIGDVNTTTNQESPSTAGPVGNSHGLEAGSLAEVKENP
PFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPD
SRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCY
LDSTLFCLFSFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKL
RKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKN
EKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLE
DTPRQCRICGGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPK
DLPDWDWRHGCIPYQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFN
IPQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaggcttatggagtcaagaaaaagcaagttcatcctattgggaagagcggatc
ttttacttgcttctccaagaatgcagtgtcatagacaagcagactcaaaagctcttgaaa
gtgcccaaaggtagcattgggcagttttttcaagaccgttcttctgtgggacactccaga
aatattccttgtaaaggcaagaaactgcagattggattaaagattctggaacaacctcac
gcagtcctgtttgtggatgagaaggatgttatagaaataaatgaaaaactagccgagttg
cttttggccattactaactgtgaggaaaggtacagtctgtttaaaagcaaaagcaggtta
actaaaggcatccaaatagatattggctcgcctgttagagtacagctgagatcaggagat
gataaatttcctggagttgttcgcttcagaggacccttaatgcaagaaaggtccttaaca
gggatatactttggagtagagttgctggaagaaggtcgcggtcagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgtgatgaggattgtggggtttttgttgctttg
gacaaactggagctggtggaagatgatgacaatgaactggaaagtgactatgcagctcca
gttgacgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggagtggacatggataatcctattggaaactgggatggaaga
tataatggaatacagctgtgcagttttgcaagtgttgaaagtacactgcttttgcatatc
aatgatgttattccagagactgtgtcacaggacaggagacctcccaagcttgcctatacc
tcaagaggtggtggtgacaaaagcttgttcaatcatagtaagccaaaggctacaggatct
acctctgaacctggaaatagaaacagatctgaagtcttctacacattgaatggctcatca
gttgactctcagcctcaaatgaaaacaaaacccccatggtatattgatgaagttgctgaa
gaccctgcaaaatcacttactgattcatctcctggatttgggcattcttcaccaccactg
cagccaccttcgacaaactctgtgtctacagaaaacagatttcactccctcccttttagc
ttgacaaaaatgtcaagtactaatggtactattggacatagtcctctctctttatctgtt
cagtcagtcattggtgatgtaaatactacaactaaccaggagagtccatcaacagcaggc
ccagtcgggaactcacatggtcttgaagcaggttccttggctgaagttaaagaaaatcct
cctttctatggagtaatccgctggattggccagccccctggagtaaatgaagtattagct
ggactggaactggaagatgaatgtgcaggttgtacggacggaacatttaaaggaactcgg
tacttcacttgtgctccgaagaaagctctttttgttaaactcaaaagctgcaggccagat
tccaggtttgcctcactacagcctgtttccaaccagattgaacgctgcaactctctagcc
tttggaggttacttaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaa
ggtttagagacaatgattggaaagaagaaaggtatccagggtcattacaactcctgttac
ttagactccaccttattctgcctgttttcttttagctctgttttggacactgtgttactc
agacctaaagaaaagaatgacgtagagtattatagtgagactcaagagctattgcggaca
gagattgtgaatcctctgagaatatatggatatgtatgtgctacaaaaataatgaaactg
aggaaaatacttgaaaaagttgaggctgcatcaggattcacttcagaggaaaaagatcca
gaagaatttttgaatattttatttcaccatattctaagagttgagccactgttgaaaata
agatcagcaggtcagaaagtacaagactgttacttctatcaaatttttatggacaaaaat
gagaaagttggagtcccaacaattcagcagttactagagtggtcattcatcaacagcaac
ttgaagtttgcagaggcaccctcttgcctgattatccagatgcctcggtttggaaaagac
ttcaaaatgttcaacaaaatttttccatccttggaattaaatataacagacttacttgaa
gacactcccaggcagtgccgtatatgtggagggcttgctatgtatgagtgcagagaatgt
tatgaagatactgatatttctgctgggaaaatcaagcagttctgcaaaacatgcaatacg
caagttcatcttcatcccaagagacagagtcataaattcaatccattgtcactacctaaa
gatctgccagactgggactggcgacatggctgcatcccgtaccagaagatggagttgttt
gctgttctctgcatagaaacgagccactatgtagcttttgttaaatatgggagggatgac
tccgcctggcttttctttgatagcatggcagatcgggatggaggtcagaatggctttaac
attccacaagttacgccgtgtccagaagttggtgaatacctgaagatgtctctagaagaa
ttacactcgctggattccagaaaaattcaaggttgtgcacgaagactactttgtgatgct
tacatgtgcatgtatcaaagtccaacgatgagtttatacaaatga
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