Gymnogyps californianus (California condor): 127023223
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Entry
127023223 CDS
T08687
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gcl03036
]
127023223
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127023223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Chromo
Helicase_C
ResIII
DEAD
CHDCT2
HDA2-3
MUN
BRK
Motif
Other DBs
NCBI-GeneID:
127023223
NCBI-ProteinID:
XP_050763215
LinkDB
All DBs
Position
17:805430..868088
Genome browser
AA seq
2701 aa
AA seq
DB search
MIMKIQKKEKQPPSLKVLSRSPMSDAWECKAQDPFASSEEQDEVSHQVTVTATDTDGQCQ
CPEEEPDGAPQKRTSTQNGMQDSGGGGTGVKKKRKKKDLGEQEGGEKAAVEVKPKRRREP
KEPKEPKKAKEPKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSESAPRTRPKKSSKD
TPVEKKKKGKRKNEIPVDSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNED
LDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPG
GLAFEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDL
FNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEAL
QIPPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCIL
ADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQI
SRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLK
NRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKT
EEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSK
GANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGK
LVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDR
FCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV
YRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGAL
MDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQ
KWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRR
FNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKH
YKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWL
ATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLL
PDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQ
GVSDGAQDAAERGSMEKEESGGEKLEGLPKQEDVVAAGVGEASEKRDEPVAAQDGSDSDR
SCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPGNHGYWLQDEMFRRASEMDSVNK
EMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVA
MCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLKL
CRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGLP
GPETLCCLYQTNSKLYSSPLYSQVDRTCESLENEAESQIKLETVDNTMSQAGGSPPDANC
ETFMSKVRDIISSNYDESSLPDSLVCMMYDEKACNSEQSSLARDSPSCTDVGSGVAKLSE
GKLEGDEDPSSCDADAMRETPFLEGLQVGCDRMDSQNEEAEPSPSPPESDPSRSVPAELC
EALQQKGDFTSPAPVLPEHGAMEGVISVGLYSPSLHNYDIKVPPEQRFISLLQEKGMEAK
SGPSQSHSEEDEEEEEDDDNSEAAADVVEGLSGPRTRAGCDPEANELGGEEQSSGLPTPE
DTCPEDVNGERESLGLGTPEGLGEPGPEGREDRGLDEESTLQHSLGQAQSQAFSLPAPLL
GAPGAEPPRAGGEAWGRGAEGQAGCREALHPEPQGVKQEECENRDEGEKASSSQSQDGPE
KYLEEESKSSASVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHA
VLKGKWPSSSQQFETQSLLTAPAVASNAGSRNSFAESEAPDPSFSNGVLISQEGFLTPAF
AKDERKHRRPYEFEMERDAKQRSLEQLAATHVHPPIVLNGWRDAAVDLSRASDGSPGNSS
PFTLNTNMPKLGTVNTLQGSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRR
KNVEGMDLIFLKERPLPTRLQDVQEDQPQPPQNSPLPDGPVAATSTPQPVPAAGSQAEKA
VPNKSLLDWLRQQSDYTLDVPGFGTNFSDKPKQRRQRCKDPSKLDINSLTGEERVPVVHK
GTGRRGYLPESKFNRILTEPVLRDAGPRRRGRRPRSELIKGPGVVADSSSGMGPLFMNGL
IAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVPAGEDVKSTLGMLPMMLPGMATVPQMF
GVGGLLNPPMTSTCTATAPTSLTSTTKSGTANAEKATEDKQSSQDVKKETLAEDKPGPSS
FSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSMFLSPGIGMALPGIQQTRHSEAANLES
QKRKRKKAKGESANPEPETVSLPEKEAANSQNCTEQTPPLSAEKEQDGPAEEEREAARDT
N
NT seq
8106 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaaaaaagaaaagcagccgccaagcttaaaagtgctgagccgc
tccccaatgtcggatgcctgggagtgcaaggcgcaggacccctttgccagcagtgaggag
caggacgaggtgtcccaccaggtgacggtgacggccacggacacagacggccagtgccag
tgcccagaggaggagcccgacggggctccccagaagcggacgagcacccagaacgggatg
caggacagtgggggtgggggcacgggggtgaagaagaaacggaagaaaaaggatctggga
gagcaggaagggggagaaaaagcagctgtggaggtgaaaccaaagaggaggagagagcct
aaagaaccaaaagagcctaaaaaggccaaggagcccaagaagccgaaggagcccaagcag
agggaggtggccaagaaaccccggaaacctcgggaacccaaagcccccaaggagcctaaa
gacaagaagagcggctctgagtctgcccccagaacaagacccaagaagagcagcaaggac
acccctgtggagaagaagaagaaagggaagaggaaaaatgagataccagtggacagtttg
gatttggatcaggatctcctgagcccatccgtgcagagcccagaggagtctgcggagtca
gccgacagccagaaacgccgctcaggacggcaagtgaagaggaggaagtacaacgaggac
ctggatttcaaggtggtagatgatgacggcgagacaatagctgtgctgggagctgggcga
acctccgcactctccgcctctactctggcgtggcaggcagaggaacctcctgaggatgat
gccaatatcattgagaagatccttgcctccaggatggtgcagaaggaggctcatcccgga
ggcctggcatttgagatggaggagttctacgtcaagtacaggaacttctcctacctccac
tgtaagtgggcaactctggaggagctggagaaggaccccaggatctcccagaaaataaag
cgcttccggaacaagcaggctcagatgaagcatatttttacagagcctgatgaggatttg
ttcaacccggactacgtggaggtagatcgaattctggaggtggctcacacgaaggaccct
gacactggggaggaggtgactcactacctggtgaagtggtgctcactgccctacgaggag
agcacctgggagctggaggaggatgtcgacccagggaagattaaagagtttgaagccctc
caaatccctccagaaatcaagcacatggtaacgtacccagaggagcgcccggcatctgag
tcctggcagaaactggagaagtcccgggagtataagaacagcaaccagctgcgggagtat
cagctggagggaatgaactggctgctctttaactggtataacagaaagaactgcatcctg
gctgacgagatggggctggggaagacaatccagtcaatcaccttcctctcggaaatattc
ctgatgggcatccatggccctttcctcatcattgcacctctctccaccatcaccaactgg
gagagggagttccgcacctggacggagatgaatgccatcgtgtaccacggcagccagatc
agccggcagatgatccagcagtacgagatggtgtacagggacacacagggtaaccctctc
cctgggatcttcaagttccaggtggttatcaccacctttgagatgatccttgccgactgc
ccggagctgaagaagatccagtggcgctgcgtggtcattgatgaggcacatcgcctgaag
aacaggaactgcaaactcctggaggggctgaagctcatggccctggagcataaggtgctg
ctgacagggacccccctgcagaactcggtggaggagctcttcagcctcctgaatttcctg
gagccacagcagttcccctcagagacagccttcctggaggagtttggagacctgaagaca
gaggagcaggtgaagaagctgcagtccatcctgaaacccatgatgctgcgacggctgaag
gatgatgtcgagaagaatctggcacccaagcaggagaccatcattgaggtggagctgacc
aacatccagaagaaatactaccgggccatcctggagaagaacttctccttcctgtccaag
ggtgccaaccagcacaatatgcccaacctcatcaacaccatgatggagctgcggaagtgc
tgcaatcacccatatcttatcaacggggcagaggagaagatcctggaagacttccgtaaa
acacacagcccggaggcgccagacttccagctgcaggcgatgatccaggcggccgggaag
ctggtgctcattgataagctgcttcccaagctgatcgccggtgggcacaaggtgctgatc
ttctcccagatggtgcgctgcctcgacatcctggaagactatctcattcagaggcggtac
acctatgagcgcattgacgggcgggtgcgcgggaacctgcgccaagctgccatcgaccgc
ttctgcaagcccgactcggatcgcttcgtctttctcctgtgcacgcgggcgggtgggctg
ggcatcaacctgaccgctgccgacacctgcatcatctttgattcggactggaacccccag
aatgacctacaggctcaagctcgctgccaccggatcgggcagagcaaggcggtgaaagtc
tatcgcctcatcaccaggaactcctacgagcgggagatgttcgacaaggccagtctgaag
ctgggcctggataaggctgtgctgcaggacatcaaccgcaagggcagcaccaacggggtt
cagcagctctcaaagatggaggtggaggatctgctgcggaaaggtgcctacggcgctctc
atggatgaggaggacgaaggatcaaagttctgcgaggaagacattgatcagatcctccag
cgcaggacacagaccatcacgatccagtctgaggggaagggctccacctttgccaaggcc
agctttgtagcatcaggaaacagaactgacatttccttagatgaccccaacttctggcaa
aagtgggccaagatagcagagctcgatacagacgccaagaatgaaaaggagagcctggtc
atcgacaggcctcgggtgcggaagcaaaccaaacactacaactcctttgaagaggatgag
ctgatggagttctctgagctggacagtgactcggatgagcgacccacgcgctcgcggcgc
ttcaacgagaagacgcggcggtacctgcgggctgagtgcttccgcgtggagaagaacctg
ctcatatttggctggggacgctggaaagatatcctgacccacgggcgtttcaagtggcac
ctgaatgagaaggacatggagatgatttgtcgggccttgctggtctattgtgtcaaacac
tacaagggggatgagaagattaagagttttatctgggatctcatcacgccgacgaaggac
ggccagaaccaggctctgcagaatcactcaggcttgtcagcaccggtgcccagaggcagg
aaagggaagaagacgaagaaccagatgctgcttcctgagataaagaatgcggactggctc
gccacctgcaaccccgaggtcgtcctgcatgacgacagctacaagaagcacctcaaacag
cactgcaacaaggttctgctgcgggtgcgaatgctctactacctgaaggctgaagtgctg
ggggaggccgcggacaaagccttcgaggggacccccgccagggagctggacgtgctgctg
ccagatattgactatgtggagatcccagtggactggtggaacgccgaagccgataaatcc
ctgctcatcggcgtcttcaagcacggttacgagaggtacaatgccatgcgggcggacccg
gcgctgtgctttctggagaaggtgggcatgccggacgagaagctgctctctgcggagcag
ggcgtcagcgatggggcccaggacgctgccgaaaggggcagcatggaaaaggaagagagt
ggtggagaaaagctggaggggctgccaaagcaggaggacgtcgtggctgctggggtgggc
gaagccagtgagaagcgggacgagccagtggcagcccaggatggctccgactcagacaga
tcctgctggcctgtctcatctgctctcacagccagactgcggaggctcgtcaccgtctac
caacgctgcaaccgcaaagagcttcctccccgtgccgagatgctcgtgcctggtaaccat
ggatactggctgcaggacgagatgttcaggagagcctctgagatggactcggtgaacaaa
gaaatgcagaaaaggtggaccaggagggagcaggcagacttctaccgcactgtctcctcc
tttggggttatctatgaccaggagaaaaagatttttgactgggcccagttccgagccatc
tctcgactggagaagaagacagatgagagtctggagaagtacttctacagcttcgtggcc
atgtgcaagaacgtttgtggtctcccactgtggaaagaggatggtcccccagaccctgac
atctacgtggagcccatcacagaggaacgtgctgccagaaccctctaccgtatcgagctt
ctgcgaaaggtgcgcgagcaggtgctcaagtgtccgcagctccacgagcggctcaagctg
tgccggccgagcctctacctgccggtgtggtgggagtgtggcaaacatgatcgggacctg
ctgatcggcaccgccaagcacggcctgaatcgcactgactactacatcatgaatgacccc
cagctgtcttttttagatgcatacaggaactatgcccagcataaaagaacggggctccca
ggcccagaaaccctgtgctgcctttaccagactaactccaaactctacagttcccctctg
tacagccaggtggaccggacttgcgaatccctggagaatgaagccgagagtcagatcaag
ctagaaactgtagacaacactatgtcccaggctgggggcagtccgccggatgcaaactgt
gaaacattcatgtctaaagtccgggacatcatttccagtaactacgatgagagctctctg
ccagactcgttggtgtgcatgatgtacgatgagaaggcctgtaacagtgagcaaagctcc
cttgcccgagacagcccaagttgcacagacgttggaagcggtgttgctaaactctctgag
ggcaagctagagggggacgaggatccgtccagctgcgatgcagatgccatgagagagact
cccttcctagagggtttgcaggtgggctgtgaccgaatggacagtcagaacgaggaagct
gagccttcaccttctccccccgaaagcgacccttcgcggagcgtcccagcagagctctgt
gaagccttgcagcagaagggagacttcaccagccctgcgccggtgctgcctgagcacggt
gccatggaaggggtcataagcgtggggctctacagtcccagtcttcataactatgacata
aaggttcctcctgagcagaggttcatcagtctgctgcaggagaaaggaatggaggcaaag
tcagggccaagtcagagccacagcgaggaagatgaggaggaagaagaggacgatgataac
tccgaggcagcagcagatgttgtggaaggcttgagtggtcccaggaccagggccggttgt
gaccccgaggctaatgaactggggggcgaggagcagagctctggtctccccacacccgag
gacacttgcccagaagacgtgaatggcgagagagagtccctggggctggggacacccgaa
gggctgggggagcccgggccagagggcagggaggaccgtggcttggatgaggagagcacc
ctgcagcactcactgggccaggctcagagccaggctttcagcctgcctgcacctctgctg
ggggccccaggggcagagcccccccgtgccgggggagaggcctggggccgaggggctgag
gggcaggcaggctgcagagaggccctgcaccctgagccccagggggtgaagcaagaagag
tgtgagaacagagacgagggggagaaagccagcagcagccagagtcaagacggtccagag
aagtacttggaggaagagagcaagagttctgcttctgtcctgcctggggagatcgatgac
cttcaggatgcccgggcaccgaccatagcccagctgctgcaggagaagacgctttactcc
ttctctgagtggcctaaggaccgtgtgatcatcaaccgcattgacaacatctgccatgcc
gtcctgaagggcaagtggccttcctccagccagcagttcgagacacaaagcctgctgaca
gctccagcggtagccagcaatgccggcagcaggaacagctttgccgagtcagaagcccct
gatcccagcttcagtaacggggtgttaatctcacaggaaggtttcctgacccctgccttt
gcaaaggacgagcggaagcacaggaggccctatgaatttgagatggagagagatgccaaa
cagagaagcttggagcagctagcagcaacccatgttcatccacccattgtgctgaatggc
tggcgcgacgcagcggtggacttgtccagagcctctgatgggtccccagggaactcctct
cctttcaccttgaacacaaacatgcccaaactggggaccgtgaacaccctccagggctcc
ctgggcatggacttgtctggcatcctccaggcagggttaatccatcctgtcacaggacaa
attgtaaacggcagcctccgaagagacgatgctgccatgaggaggagacgaggcaggaga
aaaaatgtagaagggatggacctcatcttcttgaaggagaggcctcttccaaccaggctg
caggatgttcaggaagaccagccgcagcccccccagaacagtcctctccccgatgggccg
gttgctgctacctcaactccacagccagtcccagctgcaggcagccaagcagagaaggct
gtcccaaataagagtctcctcgactggctccgtcagcagtccgactacacactcgacgtt
cccggctttggcacaaatttttcagacaagcccaagcagaggaggcaacgctgcaaggac
cccagcaaattggacattaactcactcacgggagaggagcgggtgcctgtggtacataag
ggtaccggacggcggggctacttaccggaaagcaaattcaatcgcatcctaaccgagcct
gtgctccgagacgcggggccccgccggagggggagaaggccccgaagcgaactcattaaa
ggccctggcgttgtagcagattcttcttcgggaatgggaccattgttcatgaacggactg
attgctgggatggatctagtaggacttcagaacatgagaaacatgcaagggatccctctg
accgggctggttgggtttcctgctggatttgcagcagtgcccgctggtgaggatgtgaaa
agcaccctaggtatgttgcccatgatgctgccgggcatggctactgtaccacagatgttt
ggcgttggaggacttctcaacccccccatgacaagtacttgtactgcgactgctccgact
tcgttaacaagcacaacgaaaagtggtacagccaacgcagagaaagctactgaggataaa
cagagtagccaggatgtgaaaaaagaaactctcgcggaagacaagcctggtcctagttcg
ttttctaatcagacagaatctgcaataactaccagtagtcctgtagcttttaacccgttt
cttatcccagggatgtctcctggactgatctatccctcaatgtttctttcccctggcatc
ggcatggcgctgcccggcatacagcaaaccagacactcggaggcagcgaacctggaaagc
cagaagcggaagagaaagaaagcgaaaggggaatcggcaaacccagagccagaaactgtc
tcactgccggaaaaagaagctgcgaacagtcaaaactgtacagagcaaacaccgcctttg
tcggcagagaaagagcaggacggaccagcagaggaggagcgcgaagcggctcgcgatacc
aattag
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integrated database retrieval system
