Gymnogyps californianus (California condor): 127027373
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Entry
127027373 CDS
T08687
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03022
Basal transcription factors
gcl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127027373
09124 Replication and repair
03420 Nucleotide excision repair
127027373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127027373
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127027373
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127027373
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127027373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
HscB_4_cys
VWA_3
Matrix
Motif
Other DBs
NCBI-GeneID:
127027373
NCBI-ProteinID:
XP_050769010
LinkDB
All DBs
Position
Z:complement(16678216..16690622)
Genome browser
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNTKKHITALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVFSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYQGERYCQGCQGEMKDQNVYIC
KVCQNAFCVECDLFVHDSLHCCPGCIHEHPAPISV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacccgaacggaccaagcgctgggaaggaggctacgaaagaacatgggaa
attcttaaagaagatgaatccgggtcactgaaagcgaccatcgaggacattcttttcaag
gcaaagaggaaaagactctatgaacaccatggacaagttcgacttggaatgatgcgtcac
ctttacgtggttgttgatggatcaagaactatggaggaccaagatttaaaaccgaacaga
cttacttgcactttgaagttattggaatattttgttgaagagtactttgaccaaaatccc
attagtcagattggcttaattgtaaccaagagtaaaagagctgaaaaaatgacagaactt
tcaggtaacacaaaaaagcacataactgctctgaagaaagcagtggatatgaactgcagt
ggagagccatctctatataattccctaaatttggccatgcagactttaaagcacatgcca
ggacatacaagcagagaggttttggtagtcttcagcagtctgacgacatgtgatccagcc
aacatctatgatctaattaagtgtttaaaagcagttaagatcagagtatctgtcatcggc
ctaagtgctgaagttcgagtctgtacagtacttgcccgagaaactggtggaacataccac
gttattttagatgaaagtcattataaggaactgctgatgcatcatgttagtcctccacct
gccagttcaagttctgagtgctcccttattcgaatgggttttcctcagcatactattgct
tctctgtctgatcaagatgcaaagccatcctttagcatggcgcagttggaaaataacagt
gacccgggtcttacactgggtggatatttctgtccccagtgcagagccaaatactgtgaa
cttcctgtggaatgcaaaatctgtggtcttacgttagtgtctgcacctcacctggctcgg
tcttaccatcacttgtttcctttggatgcctttcaggaagttcccctggaagaatatcag
ggggaacggtattgtcaaggctgccagggagaaatgaaagatcaaaatgtttacatatgt
aaagtgtgtcagaatgcattttgcgtggaatgcgatttgtttgttcatgattctctgcac
tgctgtcctggctgtattcacgagcaccctgctcccatatctgtatga
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