Gracilibacillus caseinilyticus: MUN88_14805
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Entry
MUN88_14805 CDS
T09432
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gcs
Gracilibacillus caseinilyticus
Pathway
gcs03410
Base excision repair
gcs03430
Mismatch repair
gcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MUN88_14805 (recJ)
03430 Mismatch repair
MUN88_14805 (recJ)
03440 Homologous recombination
MUN88_14805 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_14805 (recJ)
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MUN88_14805 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MUN88_14805 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUN88_14805 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UOQ47330
LinkDB
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Position
3140206..3142527
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AA seq
773 aa
AA seq
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MLESQSNWIFTYKNTDQESYGVLADVNVSPVIKQLLWHQGIDTEEKVDRFLLPSLDQLHS
PEQFYQIDKAIQRVKQAIEAGESILVYGDYDADGVTSTTVMVEALRESGAMCDYYIPNRF
TEGYGPNEEAFREAHSQGFQLIITVDNGIAGVEEVAVANQLGMDVIITDHHEMQETLPEA
HAIIHPKCSEDYPFKELAGVGVAFKFAQQLLGYFPEQFLDLVVVGTIADLVPLHDENRVL
VYHGLKALSRSERKGMKALKKLCQIEGNVTEEDIGFRIGPRLNAVGRLQDANLAVDLLLT
DDPEEAEELANYVQDLNTERQKIVADITKEAISQYEEADHTSQVIIVAKEGWNQGVLGIV
ASKLVQTYYRPAIVLAIDSETKQAKGSARSIDGFDMFQNCMQHRELFTHFGGHAQAAGMT
LPVDNVETLETELDTLANQQLTEDDFKPQLSISGSLAISDINMELLETIDQLAPFGMGNP
KPLFHLEATPSDIKQIGATKNHLKLRFSESGQQLDTIGFGLGEKVPYLAKQTPVEVVGEL
QINEWNGIRKPQMLIKDMAVTSWQLFDYRGMKNWQQQVNVEQPNQYFVSFQGSDIQGVPV
CDKDTVLAVSHPVEALYLLDVPTDLEDLQVLIDQVKFERLIVCFSTNDSQYFRSLPNRDE
FKWLYQLILKRKYFDYKVDAPKLASFKGWKLDKIKFMFQVFHELNFVTRKDGVIVPTDDP
SKKDLTEATVYQERKQEMELEEIFIYSSYSQLKTWFSEQMKKRSNEEEIVYGL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaagtcaatcaaattggatttttacatataagaatacggaccaagaatcatac
ggtgtactagcggatgtgaacgtatctcctgtcattaagcagttattgtggcatcagggg
atcgatacagaggagaaggttgatcgattcttgctaccttctcttgaccagttgcacagt
ccggaacagttctatcagattgataaggccatacaacgtgtcaagcaagcgattgaagca
ggagaaagcattcttgtatacggggattatgacgcagatggagttacttctacaacagtc
atggttgaagcgttgcgtgaaagtggagcaatgtgtgattactatatccctaatcgcttt
acagaaggttatggaccaaatgaagaggcttttcgagaagcgcatagccaagggtttcaa
ttaattattacagtggataatggtattgctggagtagaggaagtagctgtcgcgaatcaa
ttaggaatggatgtcattattaccgatcaccatgaaatgcaagagacacttcctgaagcg
catgccatcattcacccgaaatgttcggaagactatccttttaaggaattggcaggtgtg
ggtgtagcctttaagtttgcccagcagctattaggctattttcctgagcagttcttagat
ttagtcgtcgtgggtaccattgccgatcttgtaccgttacatgatgagaacagagtactt
gtctaccatggtttaaaggcattaagtcgatcagaacggaaaggcatgaaagcattaaag
aaattatgtcaaatcgaagggaacgtaacggaagaagatattggctttcggattggacct
cgattaaatgctgttggccgtctgcaggatgcgaatttagcggttgatctattgttaaca
gatgatccggaagaagctgaggagctagccaattatgtgcaggatctaaataccgaaagg
caaaaaattgtggcagatataacaaaagaagcgataagtcagtatgaagaagctgaccat
accagccaagtcattattgtggctaaagaaggatggaaccaaggtgtccttggtatcgtc
gcatctaagttagtgcaaacttattatcgacctgccatcgtgctagcgatagacagtgaa
acgaagcaagcaaaagggtcagcacgtagtattgatgggtttgacatgtttcaaaattgt
atgcaacatcgagagctttttactcattttggcgggcatgcacaagctgccggtatgacc
cttccagtcgataatgtagaaacactggaaacagagctggatacacttgctaatcaacaa
ttgactgaagacgactttaaaccgcagttgtctattagcggatcattagcgatctctgat
attaacatggaactattagaaaccattgatcagttagcaccgtttggtatgggtaatcct
aaaccactgtttcatttagaggcaacacctagtgatatcaagcaaattggcgcaaccaaa
aaccacttaaaactaaggttttcagaaagtggacagcaattggatacgatcggttttggc
ttaggtgaaaaagtaccatacctcgcaaaacagacacctgtagaagtagtaggagaatta
cagatcaatgaatggaatggtattcgtaagccacaaatgcttatcaaagatatggcggtt
acgagctggcaattattcgattatcgcggaatgaagaattggcaacagcaagtaaatgtt
gaacaacctaaccaatattttgttagttttcaagggagtgacatacaaggtgttccagtc
tgcgataaagatacggtattagctgtatcacatccggtagaagcactttatttgcttgat
gttccaactgatttggaagatttgcaagtgttaatcgaccaggtgaaattcgagcgtctg
attgtttgtttttcgacgaatgacagtcagtatttccgttcattacctaatcgagatgaa
tttaagtggctgtatcaattaatcctgaagcggaaatactttgattacaaggtagatgct
cctaagctagcgtcatttaaaggctggaaattggacaagatcaagtttatgttccaggta
tttcatgaattaaattttgtaacccgaaaagatggagtaatcgtcccaaccgatgatccg
tccaaaaaagatttaacagaagcgaccgtctatcaagaacgtaaacaggagatggagcta
gaagaaatttttatttattcatcttattcacaattaaaaacatggttctctgaacaaatg
aagaagaggagcaatgaggaggaaattgtttatggactataa
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