Gloeomargaritales cyanobacterium VI4D9: LQF76_01940
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Entry
LQF76_01940 CDS
T08937
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gcy
Gloeomargaritales cyanobacterium VI4D9
Pathway
gcy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gcy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LQF76_01940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gcy02000
]
LQF76_01940
Enzymes [BR:
gcy01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LQF76_01940
Transporters [BR:
gcy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LQF76_01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_25
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA_30
SbcC_Walker_B
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
WAS05676
LinkDB
All DBs
Position
433604..435445
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AA seq
613 aa
AA seq
DB search
MNRWRSRIKGWVKQPAYRLVLSVVNKYRLRLLFTFLLSTGVAFLEGSTYVLIYFALSVLG
DAQIRVPLVGDWLNRQPKLELVAVLVGVALLVQVIQSALKYASNLVSSYLGNRINVYLME
RQFGRVLSLSYPCVSRYRYGELLDYINSGGTVSMLIQTWNRLVLSVLLALAYLTVLVWIS
PILLGATLIVSVGLVAIQRRVIPKIEKISRKLANDSVQAGSFVVESVQALRVVYSFNRQQ
QILTQLHRLQWDLLKLSDRQTAWSNLPQPLSQVLVTFVLGVMLLTSLWVLSQDRPLNLIL
PALATFISAYNRFANQGQLIANTFTSLAGSFGSITRLNEFLSNEDKEFLRTEGLPFAGIQ
REIRFDRVTLQYPGTAAPAVVDLSFTLPAGQVTALVGASGAGKSSVADLLIALYEPTAGR
ILVDGVDRRELSLADWWHHLGVVSQDNFVFNATIRENIRFGRLEATDTEVERAAAAAYAA
EFIERLPQGYDTVVGERGYRLSGGQRQRLALARAILRQPKLLVLDEATSALDSQSEALVQ
QALYAFQQNRTVLVIAHRLSTIRNADQILVLEQGRLVEQGTHEQLLRQGGHYAHYWQLQV
AGQKPTPELGARA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttggcgtagccggatcaagggttgggtcaagcaacccgcctaccgcctagtt
ctaagtgtcgttaataagtatcggctccggttgttgtttacatttttactcagcaccgga
gtagcatttttggaggggtcaacctatgtgttgatctacttcgccttgagtgtattgggg
gatgcccaaatccgagtgcccttggtaggggactggttaaatcgtcagcccaaactggaa
ctggtggcggttttagtgggtgtggcgctgttggtgcaggtgatccaaagtgccctgaaa
tacgccagtaatctggtgagtagctatctgggcaatcgtattaatgtctatctaatggag
cggcaatttgggcgggttttaagcctcagttatccctgtgtcagccgctatcgttatggg
gagttgttggactatatcaactccggtggtacagtgagtatgttgattcagacctggaat
cggctagtgttatcggtgctgttggcactggcctatttgacggttttggtctggatttcg
ccaattttattgggggcaacgctgattgtatctgtagggttggtggcgattcaacggcgg
gttattcccaaaattgaaaaaatctccaggaaattggcgaatgattctgtgcaggcaggt
agctttgtggtggaaagtgtccaggcattgcgcgtggtgtacagctttaatcgccagcag
caaattctgacgcaattgcaccgtctgcaatgggatttgcttaaactcagtgaccggcaa
accgcctggagtaacctgccgcaacccctgtcccaggtcttggttacgttcgttttgggg
gtaatgttgctgaccagtttgtgggtgttgagccaagaccgcccattgaatttaattttg
cccgccctggcaacctttatctctgcctataatcgctttgccaatcaaggacagttaatt
gccaataccttcactagcttggcagggtcatttggcagtattacacggttgaacgagttt
ttgagcaatgaggataaggaatttttgcggacggagggcttgccgtttgcgggcatccag
cgggaaatccggtttgaccgggtgaccttgcagtatccggggacggcggcaccggcggtg
gtggatttgagttttaccctcccggcggggcaggtgacggctttggtgggggcttccggg
gcagggaaatcctccgttgccgacctgctgattgccctgtatgaaccgacggcggggcga
attttggtggatggggtggatcggcgggaattgtctctagcggattggtggcaccatctg
ggggtggtgagtcaggacaattttgtgttcaatgccacgattcgggaaaatatccgcttt
ggccggttggaggcgacggatacggaggtggaacgggcggcagcggcggcctatgcggca
gaatttatcgagcggttgccccaggggtacgatacggtggtgggggaacggggctaccgg
ctttccgggggacagcggcaacgtttggctctggcacgggcgattttgcgccagcccaag
ctgttagtactggatgaggccacctcggctctggattcccaatcggaggctttggtgcaa
caggctttgtacgcttttcaacaaaaccgcacggtactggtgattgcccaccggttgtcc
acgattcgcaacgccgaccaaatcctggtgctggagcaggggcgcttggtggagcagggc
acccatgaacaattgctccgccagggaggacactacgcccactactggcagttgcaggtg
gcggggcaaaaaccgactccggagttaggggcgagggcgtaa
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