Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI1816
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Entry
GDI1816 CDS
T00631
Symbol
xthA
Name
(GenBank) putative exodeoxyribonuclease III protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GDI1816 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdi03400
]
GDI1816 (xthA)
Enzymes [BR:
gdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GDI1816 (xthA)
DNA repair and recombination proteins [BR:
gdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GDI1816 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CAP55759
RhizoBase:
GDI1816
UniProt:
A9HIE6
LinkDB
All DBs
Position
complement(1849785..1850597)
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AA seq
270 aa
AA seq
DB search
MIGNATHMRIVTWNINSLRLRLPLLARLGAELRPDIICLQETKVPDDLFPADAIRDLGYV
HIQHRGMKSYNGVAILSRVPLTPLDDTPDWCARSDCRHIAASFPMGGRPVELHNFYVPAG
GDIPDPDANPKFAHKLAFVDEATSWFTGRTSHRTILVGDLNIAPLEQDVWSHKQLLNVVS
HTPPEVTRLMAWQACGFVDAMRHFVPPDEKLYTWWSYRNRDWKASNRGRRLDHVWITPDL
TAALKDMTVLREARDWPTTSDHVPVAMDFA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggcaatgccacacatatgcgcatcgtcacgtggaatatcaattcgcttcggctg
cggctgccgctgctggcccggctgggcgcggagctgcggcccgacatcatctgcctgcag
gagaccaaggtccccgacgacctgttccccgccgatgcgatccgcgacctgggctatgtc
catatccagcatcgcgggatgaaatcctataacggcgtcgccatcctgtcgcgcgttccg
ctgacccccctggacgacacgccggactggtgcgcccgcagcgactgccgtcacatcgcg
gcctcgttccccatgggggggcggccggtggaactgcataatttctacgtgcccgccggt
ggcgacatccccgacccggatgccaacccaaaattcgcccacaagctggctttcgtggac
gaagccacgtcctggttcacgggccgcaccagccaccgcaccatcctggtgggtgacctg
aacatcgccccgctggaacaggatgtgtggagccacaagcagctgctgaacgtggtcagc
cacaccccaccggaagtcacgcggcttatggcgtggcaggcctgcggcttcgtcgatgcg
atgcgccatttcgtgccgcccgacgagaagctgtatacgtggtggtcctaccgcaaccgc
gactggaaggcctccaatcgcggccgccgcctggaccatgtctggatcacgcccgacctg
acggcggcgctgaaggacatgacggtgctgcgcgaggcacgggactggcccacgacgtcg
gaccacgtgcccgtcgcgatggatttcgcctga
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integrated database retrieval system