Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI3376
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Entry
GDI3376 CDS
T00631
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi00521
Streptomycin biosynthesis
gdi00523
Polyketide sugar unit biosynthesis
gdi00541
O-Antigen nucleotide sugar biosynthesis
gdi01100
Metabolic pathways
gdi01110
Biosynthesis of secondary metabolites
gdi01250
Biosynthesis of nucleotide sugars
Module
gdi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GDI3376 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GDI3376 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GDI3376 (rfbC)
Enzymes [BR:
gdi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GDI3376 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF1501
Motif
Other DBs
NCBI-ProteinID:
CAP57319
RhizoBase:
GDI3376
UniProt:
A9H3H9
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Position
complement(3482944..3483495)
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AA seq
183 aa
AA seq
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MQIEHLSIPDILLLTPRRFADERGFFSETYNLRTMAQAGIDVAFVQDNHSLSRQRGVIRG
LHCQLPPHAQGKLVRCTRGAIWDVAVDARQGSPSFGRWVAAELSEENGSQLWIPPGFLHG
FCTLTENAEVQYKCTDLWDRDCERSVRWNSPDLAIAWPVAPEDAVLSEKDAAAPDFSTVR
DWF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgaacacctttccatccccgacatcctgctgttgacgccgcgccgcttcgcg
gatgagcgggggttcttctccgagacctacaacctgcgcaccatggcccaagctggaatc
gatgtggcgttcgtgcaggacaatcacagcttgtcgcgccagcgtggcgtgattcgcggc
ctgcattgccagttgccgccccacgcccagggcaagctggtgcgctgcacgcgcggcgcg
atctgggacgtggcggtggatgcgcggcagggctcgcccagcttcggccgatgggtcgcc
gccgaactgagcgaggaaaacgggtcgcagctctggattccgccgggattcctgcacggg
ttctgcaccctgaccgagaatgccgaggtgcagtataaatgcaccgacctgtgggaccgc
gactgcgaacgctcggtgcgttggaattccccggacctggccatcgcgtggccggtggcg
cccgaggatgccgtcctgtcggagaaggacgccgccgcgccggacttttccaccgtgcgg
gactggttctga
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