Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_1247
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Entry
Gdia_1247 CDS
T00798
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K07267
porin
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gdj02000
]
Gdia_1247
Transporters [BR:
gdj02000
]
Other transporters
Pores ion channels [TC:
1
]
Gdia_1247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
ACI51030
LinkDB
All DBs
Position
complement(1385664..1387202)
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AA seq
512 aa
AA seq
DB search
MIRTVFGAAVVLSISGLMLSDGSARAQSTRSDVAATTRPVVVGGYANRVPARIVPPPASK
QAVPASTASKQAAAAHVYVPPSSLAGYFPPSYEEWIRGSTMTGDWGGLRTHLEDRGVHIQ
GHFLEDASGNPVGGKYAGVRYAHEFGLGADINFARLIHHDIGVLHILLTERAGLSLAAGP
LGGAVDSVQQIFGSGETVRITRLSLEKQFNRYVSMEAGWINTENDFGQSTMHWGMSIYCQ
FQTNAICGMPQGLAMNGGYGWYPTAHPGAWLKLYPAGNDHYLVSAGIYNVDNTISNTHNG
FKLGLDDTTGVYLPFQLGWHHGNDYTGDMDGNIRIGGYWDTSEVPIVTSKAGAYQPASVE
LIDLPTTQIRGRFGGWFEGDQMIQRDSSGSGRGTVIFGSFIWGDPRTALSPYFATWGIIR
KGTLPNRPNDTISFGGKIAVLNPKMAQYAGMLQQEGQKAIRPSNEPAIELNYGWRPTPWA
TLRPGLQYVWHPGGTNRYANAFIIDMETGLTF
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtactgtgttcggggcggcggtcgtgctgtccatatccggcctgatgctatcc
gacgggtccgctcgcgcgcagtccacccggtccgacgtcgcggcgaccacgcggccggtc
gtggtgggcggctatgcgaaccgggtcccggcgcggatcgtcccccctcccgcctcgaag
caggccgtcccggcatccaccgcctcgaaacaggccgcggcggcgcacgtctatgtgccc
ccgtcctcgctggcgggctatttcccgcccagctacgaggaatggattcgcggcagcacc
atgacgggcgactggggggggctgcgtacccatctggaagatcgcggcgtgcatatccag
gggcatttcctggaagacgcgtccggcaatccggtgggcggaaaatatgccggtgtccgc
tatgcgcatgaattcgggctgggcgccgacatcaatttcgccaggctgatccatcatgac
atcggcgtcctgcatattctgctgaccgaacgcgcgggcctcagcctggcggcgggcccg
ctgggcggcgcggtggattccgtgcagcagatcttcggctcgggcgagaccgtgcgcatc
acgcgcctgtcgctggaaaagcagttcaatcgctacgtctcgatggaagccggctggatc
aacaccgaaaacgatttcgggcagtccaccatgcattggggcatgtcgatctactgccag
ttccagaccaacgcgatctgcggcatgccgcaggggctggcgatgaatggcggctatggc
tggtatcccacggcccatccgggcgcgtggctgaagctctatccggccggcaacgaccat
tatctggtgtcggcgggtatctataacgtcgataacaccatctcgaacacccataacggc
ttcaagctgggactggacgatacgacgggcgtctacctgccgttccaactcggctggcat
cacggcaacgactacaccggcgacatggacggcaatatccgcatcggcggatactgggac
acgtccgaggtcccgatcgtcacctccaaggccggggcctatcagccggcgagcgtcgag
ttgatcgacctgccgaccacccagatccgcggccgcttcggcggctggttcgaaggcgac
cagatgatccagcgcgacagttccggcagcggccggggcacggtcattttcggatcgttc
atctggggcgatccgcgcaccgcgctgtcgccgtatttcgcgacctggggcatcatccgc
aagggaacgctgcccaaccgtccgaacgatacgatcagcttcggcggcaagatcgcggtg
ctgaatccgaagatggcgcaatatgcgggcatgctgcagcaggaaggccagaaggcgatc
cgtccctcgaacgaaccggccatcgaactgaactatggctggcggccgaccccgtgggcc
acgttgcgccccggcctgcaatatgtctggcacccgggcggcaccaatcgctacgccaac
gccttcatcatagacatggaaaccggattaaccttctaa
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