Geobacter sp. M18: GM18_0200
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Entry
GM18_0200 CDS
T01421
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
geb
Geobacter sp. M18
Pathway
geb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GM18_0200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geb03400
]
GM18_0200
Enzymes [BR:
geb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GM18_0200
DNA repair and recombination proteins [BR:
geb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GM18_0200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_16
DAP3
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
ADW11689
UniProt:
E8WLW9
LinkDB
All DBs
Position
235820..238078
Genome browser
AA seq
752 aa
AA seq
DB search
MQTDPPHIVEVAIPLPLEGSFHYLVPERLSPLAVAGKRVLVPFGRRKVTGYLLGDAEAPG
AGELKEVLEVLDEEPLFTAAELEFYRWIAGYYLHPLGEVIKMALPAGINLVSRYRCEEAE
DGTPVLKEYLAGGRSVRTERLYTAVPDCTVRPRGKGLEILEYLLELGECSGPELRERFGS
CTAQLGRLVELGAARLSQREVYRDPFRAQQYGHDGALPLNQAQAEALARLSAALHSGEFS
PFLLHGVTGSGKTEVYLQAIAIALAAGKSALVLVPEIALTPQLVGRFKRRFDCGIAVLHS
GLSDGERFDEWRRIRRGEALIVIGARSALFAPLEGVGVIVVDEEHEGSYKQSEGVRYNAR
DLALVRGKLARAVVLLGSATPLVTSYHAAQVGRLGYLQLPDRVRELPMPETRMLDARSRK
GETFLPELIEAIGENLDAGGQTLLFLNRRGFATYLVCETCGHVLRCPNCAVTLTYHRIKG
KHVCHYCDFSMLPPGSCPDCQSGAITLLGRGTERVEDQVQKLFPDARVSRMDRDSTRGKG
GHARVLKELEEGRVDILIGTQMIAKGHDFPGVTLVGVLSADASLNLPDFRSAERTFQLVT
QVMGRAGRGDKPGRVLVQTLAPEHYALTYAVAHDYQGFYREEIAFREEVGYPPFAHLAAL
TFSAVAAGQGEGAAEEAAARLRKIKRDCRLRVEVLGPVTAPLGKVRGRFRWQILLKGVER
ADLHRLLFHFRGGFSHHSTVRLTIDVDPVDML
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagaccccccacacatcgtagaggtcgccatcccgcttccgcttgaaggaagc
ttccactacctggtgcccgagcgcctgtcacccctcgccgtcgccggcaagcgcgtgctg
gtccccttcggccgccgcaaggtgaccgggtacctcctgggcgacgccgaggcgccggga
gcgggggagctgaaggaagtgctggaggtcctcgacgaggagccgcttttcaccgcggcc
gagctcgaattctatcgctggatcgccggctactacctgcaccccctgggggaggtgatc
aagatggcgctccccgccgggatcaacctggtgagccgctaccgctgcgaggaggccgag
gacggcacgccggtgctcaaggagtacctggccggaggaaggagcgtcaggaccgagcgg
ctctacaccgccgtccccgactgcacggtgcgcccgcggggcaaggggctggaaatcctc
gaatacctgctggagctgggggagtgctccggacccgagcttagggagcgcttcggcagt
tgcacggcacagctggggcgcctggtcgagctcggtgcggcgcgcctttcccagcgcgag
gtctaccgcgacccgttccgcgcccagcagtacggccacgacggcgcgctccccctgaac
caggcccaggccgaagccctggccaggctctctgccgcccttcattccggcgagttctcc
ccgtttcttttgcacggcgtcaccggcagcggcaagaccgaggtctacctgcaggccatc
gccatagcgcttgccgccggcaagagcgcgctggtgctggtcccggagatcgccctcacc
ccgcagctggtggggcgcttcaagaggcgctttgactgcggcatcgcggtcctgcactcg
gggctctccgacggggagcgcttcgacgagtggcgccgcatccggcgcggcgaggccctg
atcgtgatcggcgcccgctcggccctgttcgctcccctggaaggggtcggggtgatcgtg
gtcgacgaggagcacgaggggtcctacaagcagtccgagggggtgcgctacaacgcgcgg
gacctggccctggtgcgcggcaagctggccagggcggtggtgctcctgggttcggccacg
ccgctggtcacgagctaccacgcggcgcaggtcggcaggctcgggtacctgcagctcccg
gaccgggtgcgcgagctccccatgcccgagacgaggatgctggacgcgcgcagccggaag
ggggagaccttcctccccgagctgatcgaggcgatcggcgagaacctggacgcggggggg
cagaccctcttgttcctgaaccggcgcggcttcgccacctacctcgtctgcgagacctgc
ggccacgtgctgcgctgccccaactgcgccgtgacactcacctaccaccggatcaagggg
aagcacgtctgccactactgcgacttctcgatgctcccccccggcagctgccccgattgc
caaagcggcgccatcaccctcctggggcgcggcaccgaacgggtcgaggaccaggtgcag
aagctcttccccgacgcccgggtctcccggatggaccgcgactccacccgcggcaagggg
gggcatgcccgcgtcctgaaggagctggaggaggggagggtcgacatcctgatcgggacc
cagatgatcgccaaggggcacgatttccccggtgtcaccctggtcggggtcctctccgcc
gacgcgtcgctgaaccttccggatttccggagcgcggagcgcaccttccagctggtcacc
caggtgatggggcgggccgggcgcggcgacaagccggggcgggttctggtgcagacgctc
gcacccgagcactacgccctgacctatgcggtggcgcacgactaccaggggttctaccgt
gaggagatcgcttttcgcgaggaggtggggtatccccccttcgcgcacctggctgcgctc
accttctccgccgtggcggcggggcagggggagggtgcggcggaggaggccgcggcacgt
ctgaggaagatcaagcgtgactgccgcctgcgggtcgaggtgctggggccggtgacggcg
ccgcttgggaaggtgcgcggcaggttccgctggcagatactgttgaaaggggtggagcgg
gccgacctgcaccggctgctctttcacttcagggggggcttcagccaccactccaccgtg
cggctgaccatcgacgtcgacccggtggacatgctgtaa
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