Geobacter sp. M21: GM21_2113
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Entry
GM21_2113 CDS
T00933
Name
(GenBank) polyketide-type polyunsaturated fatty acid synthase PfaA
Organism
gem
Geobacter sp. M21
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
PP-binding
Ketoacyl-synt_C
KR
Acyl_transf_1
adh_short
KAsynt_C_assoc
Thiolase_N
PKS_DH_N
Motif
Other DBs
NCBI-ProteinID:
ACT18165
UniProt:
C6E970
LinkDB
All DBs
Position
2457146..2464477
Genome browser
AA seq
2443 aa
AA seq
DB search
MKTDDLKPAASSNGTQLAIIGIGCLFPKADDRDAYWANIADGIDAITEVPETHWPVDAYY
DANQKSPDRTYGRRGGFLSPVDFNPMEFNIPPNVLEAIDTSQLLGLVAAGQALKDAGYGP
ERSFDKSRASVIIGVTGTLELVIPLGARLGHPIWRSALKDAGVDEATANDVVERISDSYV
PWQENSFPGLLGNVVAGRISKQYDLGGTNCVVDAACASSFSALHLASMELASGKSDIVVT
GGIDTFNDIFMYMCFSKTPALSPSGNAKPFDVSADGTILGEGLGLVVIKRLADAERDGDR
IYAVVRGVGSSSDGKGDAIYAPSAAGQKNALLNAYKNADVTPQSIGLIEAHGTGTKVGDA
VEVSALRDVYGESELPWCCLGSVKSQIGHTKAAAGSAGLIKAALALHHKVIPPTIKVQTP
QKEVVGEKSPFYLAKEKRPWFPRADVPRRAAVSAFGFGGSNFHVVLEEYRADKKAADWDG
NTQILAFSGADAARLAAGLDRVPADAAWSAVRELAFQTRASFDAKGALRLALVIERGRTN
VASLVKNAKAMLEKNSKSAWQTPDGAFFGCGAAGKLGMLFPGQGSQYTGMLNDLACRFPQ
LLNAVTAANEGFTSAGGRRLSDLIYPPSAFDEETRSKQEEALRATQAAQPAIGAVSLGAL
RLMQSFGLEPEAVAGHSYGELTALCAAGRLDESALHALSRLRGELMGAGKGDKGSMLAVS
APLSKIAEVVAAEKLDLVIANKNAPSQAVLSGACAQIKRAVELFKGRGLTCKELPVAAAF
HSTLVADAATPFLAALAKIEMHKAKIQVFANTTAAVYPADAAAAKAQLASQLAMPVEFVA
EIEAMYAAGITSFVEVGPGNRLTGLVQAILADRPHSAVALDASSGKRAGVADLGRTLAQL
AVLGFGVKLASWDEGYRPAPAGKKPLLSIPLCGANYQKPKPKKPPVQPKPAVVAAAAAPQ
AAPVAMNAPAAQPPAYQAAVAAPREAIFQAAPSAAAAPQAALSESLRLAREGMAVLQRMQ
EDTAQLHRRFLEGQETATRTFQTLLQQQQQLILGASISPAAVAPATVPVQAQAQAYVAPA
PVVAPAAQVTAPAAKAPVAPAAPAAPAVAASPAPAAPAPASVGADSARITQVLLAVIAEK
TGYPVEMLELDMGMDSDLGIDSIKRVEILSTLQERLPGTPAIGPEHLGTLRTLGDIAGHL
CASTAASAPAAVATAAPAAATSGLAAEQITSTLLLVVAEKTGYPVEMLEFDMGMDSDLGI
DSIKRVEILSTLQERLPGSPAIGPEHLGTLRTLGDIAGFLSASAVSAPAAAAAPAVATGS
AIAAGEITSTLLLVVAEKTGYPVEMLELDMGMDSDLGIDSIKRVEILSTLQERLPGTPAI
GPEHLGTLRTLGDIAGFLSASAVSAPSAASAPAVVTGSAVAASEVTSTLLSVVAEKTGYP
VEMLELEMGMDSDLGIDSIKRVEILSTLQERLPGTPAIGPEHLGTLRTLGDIATYLAAGS
ATAAPAGAGGASPLAASAAAPAQPVAPPAAASSDPARIMTTLLEVVADKTGYPVEMLEPG
MGMDSDLGIDSIKRVEILSTLQERLPDTPAIGPEHLGTLRTLGDIADFLVGASSAAAPAA
EGAAAAATAAAVEANQAVAAEPVPAPVQAIERSSVTPVELSADEEGEAIVLANDGEIWVT
DDGSAFASELCGILLEHGCSVRKVNAAEAQQTAPAGKLSGLVICAPMSGTDDIFLENAFQ
LVKNAAGALNESARAEGAVCVTVSRLDGAFGFGSGKSIKDPLSGGLAGLAKTAALEWPEV
SCKAIDLGEFPHAAAAAGAVAIEMLRRGPVEVGLSSKGRFALQTVVLPCAPAPAEPAIKA
GDVVVITGGGRGVTAISALALAKEYKPFLVLLGRSSEPEEEAAWLAGVSGEAEIKRVIMQ
NAVGKLHPREIEERYRAVVAGRELRDTLQKISAVGAEAIYRSVDIRDRSAMELLLGEVRR
AHGPIRGVVHGAGVLADRLIVDKTPEQFGQVYSTKVEGLRALLHATRNDELRFIALFSSS
TGRFGRVGQVDYAVANEVLNKVAQGEARRRGDCRSVSINWGPWDGGMVTPALKKVFAAEG
IGVIDLAEGGEFLAKEISAAGAPVEIVAIAQLPEQKGAAAPAPSAAKQENLSEAFALTLT
VPEFPFLRSHVLDGKAVVPMAVIVEWLAHGALHGNPGFRFHGFNDLRICKGVVFEDNTSF
PLSVLAGRAVKKESFWLVPVELSSPGVNGRTILHARAEIVLATKHVEGIRSITEIPATAY
APHDGVIYNNERLFHGPDLHGIEHVDGCSAKGIAASVKGAPAPGKWIRRPLRSAWLTDPL
VMDSAFQMMILWSFERFGAGSLPCFAGRYRQFQESFPKEGAQVVIRVTSENPRGASADME
FLDRNTGKLVARLEGYECVIDPSLKQAFQRNKLRTVSVALGAA
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaactgacgatctgaagccggccgcctccagtaacggaactcagcttgccatcatc
ggcatcggttgcctttttcccaaggccgacgaccgtgacgcgtactgggccaacatcgcc
gatgggatcgacgccatcaccgaggtccccgagacccactggccggtggacgcctactac
gacgcaaaccagaagagcccggaccgcacctacggccggcggggtggcttcctctccccc
gtcgacttcaatccgatggagttcaacatcccccccaacgtcctggaggcgatcgacacc
tcccagcttttggggctcgtcgctgccggacaggcgctgaaggacgcggggtacggcccc
gagcgcagcttcgacaagagccgcgcttcggtcatcatcggggtcaccggcacgctggag
ctggtgataccgctcggcgcgcggctgggccacccgatctggcgctcggccttgaaggac
gcgggcgtcgacgaggcaaccgccaacgacgtcgtggagcggatctccgactcctacgtc
ccctggcaggaaaactcgttcccgggtcttctgggcaacgtggtcgccggccgcatcagc
aagcaatacgacctgggcgggaccaactgcgtcgtcgacgctgcctgcgccagctccttc
agcgcgctgcatctcgcctccatggagcttgcctccggcaagtccgacatcgtggtgacc
ggcggcatcgacaccttcaacgacatcttcatgtacatgtgcttcagcaagacccccgcc
ctgtcacctagcggcaacgcgaagccgttcgacgtttccgccgacgggaccattctcggc
gaggggctcgggctcgtggtcattaagcggttggccgacgccgagcgcgacggcgacagg
atctacgcggtggtgcgcggcgtcggttcctccagcgacggcaagggtgacgcgatctac
gccccgagcgccgcgggccaaaagaacgcgcttttaaacgcctacaagaacgccgacgtc
acgccgcagagcatcggcctgatcgaggcccacggcaccggcaccaaggtgggggacgct
gtcgaggtgagcgcactgcgcgacgtatacggcgagtcggagctcccctggtgctgcctc
ggctcggtcaagtcccagatcggccacaccaaggccgccgcaggttccgcaggtctcatc
aaggcggcgctcgcgctgcaccacaaggtgatccccccgaccatcaaggtgcagaccccg
caaaaagaggtggtcggggagaagtcccccttctatctcgccaaggagaagcgcccctgg
ttcccgcgcgccgacgtaccgcgccgcgccgccgtcagcgccttcggtttcggcggctcc
aactttcacgtggtccttgaggaataccgggccgacaagaaggcggccgactgggacggc
aacacccagatcctcgccttttccggcgccgacgccgcgaggcttgccgccgggctcgac
cgggtgccggcggacgctgcctggagcgccgtcagggagctggccttccagacccgcgcg
agcttcgacgcgaagggggcgctgcgccttgccttggtgatcgagcgcggccgcaccaac
gtcgcctcgctggtgaagaacgcgaaggccatgctggagaagaactcgaaatccgcctgg
cagacccccgacggggccttcttcggttgcggcgccgccggcaagctcggcatgctcttc
ccggggcagggctcccagtacaccgggatgctgaacgatctcgcctgccgcttcccgcag
ctcttgaacgcggtcaccgccgccaacgaaggtttcacttccgccggcggcaggaggctt
tccgacctcatctaccccccttccgccttcgacgaagagacccgttccaagcaggaggag
gccctgcgggcgacccaggcggcgcaaccggccatcggcgccgtgagcctcggcgcgcta
cgcctcatgcagtccttcggccttgagccggaagctgtcgccggccacagctacggcgag
ctgaccgccctctgcgccgctggccgcttagacgaaagcgccctgcacgccctgtcgcgc
ctgcgcggagagctgatgggcgcgggcaaaggggacaaggggagcatgctcgccgtctcc
gcgccgctttcgaaaatcgccgaggtggtagcggccgagaagctggacctcgtgatcgcc
aacaagaacgccccctcgcaggcggtcctttccggcgcctgcgcccagatcaagcgggcc
gtcgagctcttcaagggacgcggactcacctgcaaggagcttccggtcgcagcagctttc
cacagcacgcttgtcgccgacgccgccacgccgtttctggccgcgctcgccaagatcgag
atgcataaggcgaagatccaggtcttcgccaacaccacggccgccgtctaccctgccgac
gccgcagccgccaaggcgcagctcgcttcccagctcgccatgccggtggagttcgtggcg
gagatagaggcgatgtacgcggcgggcatcaccagcttcgtggaagtcggccccggcaac
aggctcaccggcttggtgcaagccatcctcgccgaccgtccgcactcagccgtagccctc
gacgcctcctcgggcaagcgcgcaggcgtggccgacctgggccgcaccttggcgcaactg
gcggtgctcggtttcggcgtgaagctcgcctcctgggacgagggttatcgcccggctccc
gcagggaaaaagccgcttttgagcattcccctctgcggcgccaactaccaaaaacccaaa
ccgaagaagccgccggtccagcccaagcccgcagtagtggctgcagcagccgctccccag
gcggcaccagtcgccatgaacgcgcctgctgcacagccgcccgcttaccaggctgcagtt
gctgcgccccgggaagctatcttccaggccgctccgtccgccgccgcagcaccgcaggcg
gcgctgagcgaatcgctgcgcctggcgcgcgaagggatggcggttctgcagcggatgcag
gaggatacggcgcagttgcaccgccgtttcctcgaagggcaggagaccgcaaccaggacc
ttccagaccctgctccagcagcagcaacagttgattctaggcgcctccatctcccccgcc
gcagtggctccggcgaccgtgccggttcaggcgcaggcgcaggcttacgtcgctccggct
ccggtcgtcgcgcccgccgcacaagtaaccgccccggcggcaaaagctcccgtcgcaccg
gcagctccggcagctccggcagtcgccgcctcgcccgctccggcagccccggctcccgcg
tcagtcggagccgattcggcgcgcatcacgcaggtgctcctggccgtgatcgccgagaag
accgggtacccggtcgagatgctggaactcgacatggggatggactcggacctggggata
gattcgatcaagcgcgtcgagatcctctccacgctgcaggagcgcctccccgggaccccg
gccatcggccccgagcacctggggacgctgcgcaccctgggcgacatcgccgggcacctc
tgcgcttcgacagcggcctcggccccggcagcggtagcaaccgcggcgcccgccgccgct
acttccgggctcgcagccgagcagatcaccagcacgcttctcttagtagtcgccgagaag
acgggctatccggttgagatgcttgaattcgacatgggcatggactcggatctcgggatc
gattcgatcaaacgggtcgagatactctccaccctgcaggagcgtcttcccggctccccc
gcgataggtcccgagcacctggggaccctgcgcaccctgggggacatcgccgggttcctc
tccgcctcggcagtttccgccccggcagcggcagcggcacccgccgtcgccaccggatcc
gccatcgccgccggcgagatcaccagcacccttctcttagtagtcgccgaaaaaaccggc
taccccgtggagatgctggaactcgacatgggaatggacagcgacctcggcatcgactcc
atcaagcgcgtcgagatcctctccacgctgcaggagcgcctccccggcaccccggccatt
ggccctgagcacctcggcacgctgcgcaccctgggggacatcgccggattcctctccgcc
tcggcagtttccgccccgtccgcagcctccgcccctgccgtcgtcaccggttccgccgtt
gccgccagcgaggttacaagcacccttctctccgtggtcgccgagaaaaccggctacccc
gtggagatgctggaactcgagatgggtatggacagcgacctcgggatcgactccatcaag
cgcgtcgagatcctctccacgctgcaggagcgcctccccggcaccccggccataggtccc
gagcacctgggtactctgcgtaccctgggcgacatcgcgacctacctcgctgccggttcg
gccacggccgcacccgccggcgctggcggagccagtccccttgccgcttcggcggccgca
ccggcgcagcccgtagcacctccggccgccgcctccagcgacccggctcgcatcatgacg
acgctccttgaggtagtcgccgacaagaccggctaccccgtggagatgctggagccggga
atggggatggacagcgacctcggcatcgactccatcaagcgcgtcgaaatcctctccacg
ctgcaggagcggcttcccgacacacccgccataggccccgagcacctggggaccctgcgc
accctgggcgatatcgccgatttcctggtcggggcttccagcgctgcggcacccgccgct
gaaggggctgccgctgccgccaccgctgctgccgtcgaggcaaaccaggcagttgccgcg
gaaccggttccggctccggtccaggctatcgagcgcagcagcgtcacccctgtcgagctt
tcggctgacgaggagggggaggcaatcgttctcgccaacgacggggagatctgggtcacc
gacgacggctcggcgttcgcctccgagctttgcggcattctcctggagcacggctgctcg
gtccgcaaggtgaacgcggccgaggcccagcagaccgcgcccgctgggaagctctccggc
ctggtgatctgcgcgccgatgtcgggcaccgacgacattttcctcgaaaacgccttccaa
ctggtaaagaacgcggccggcgccctgaacgagtcggctcgcgccgaaggggccgtctgc
gtcaccgtctcacgtctggatggggccttcggtttcggctccggcaagagcatcaaggat
ccgctctccggcggactggcagggctcgccaagacggcggcgctggaatggccggaagtc
tcctgcaaggcgatcgacctgggcgagttcccgcatgcggctgccgccgccggcgccgtc
gccatcgagatgctgcgccgcggtccggtcgaggtaggcctctccagcaaagggcgcttc
gcgctgcaaacggtggtgctcccctgtgcaccggctccggcggaacccgctatcaaggcc
ggtgacgtggtggtaatcaccggcggcgggcgcggcgtaacagcgatctccgccctggcg
ctcgccaaggagtacaagccgttcctggtgctcctgggtcgcagctccgagcccgaggag
gaggcagcctggcttgccggcgtctccggcgaggccgagatcaagcgcgtcatcatgcag
aacgcggtagggaagctccacccgcgcgagatcgaggagcgctaccgtgccgtcgtggcc
gggcgcgaactgcgcgacaccctgcagaaaatctccgccgtcggcgccgaggcgatctac
cgctcggtcgacatccgcgaccgcagcgccatggaactcctcctgggcgaggtgcggcgc
gcccatggcccgattcgcggcgtggtccacggcgccggcgtcctcgcggaccggctcatc
gtcgacaagacccccgagcagttcggccaggtctacagcaccaaggtcgaagggctgcgc
gcgctactgcacgcaacgcgcaacgacgaactccgcttcatcgccctcttctcctcctcc
accggccgcttcggccgcgtgggccaggttgattacgcggtagccaacgaggtcctcaac
aaggtggcccagggcgaggcgcgccgtcgcggcgactgccgcagcgtcagcatcaactgg
ggtccctgggacggcggcatggtcaccccggctttgaagaaagtgttcgcagccgagggg
atcggcgtcatcgatctcgccgaagggggagagttcctcgcgaaagagatctccgccgcc
ggcgcgccggtcgagatcgtggccatagcccaactccccgagcaaaagggagcggcagcc
ccggcgccctccgcggcgaagcaggagaacctctccgaggcgttcgcgctgaccctgacc
gtcccggaattcccgttcctgcgctcgcacgttttggacggaaaagcggtggtccccatg
gccgtcatcgtggaatggctcgcccacggcgcgctccacggcaaccccggcttccgtttc
cacggcttcaacgaccttcgcatctgcaaaggggtggtcttcgaggacaacacctcgttc
cccttgagcgtcttggccgggcgcgccgtaaagaaggaatcgttctggctggtgccggtc
gagctttccagccccggggtcaacggcaggaccatcctccacgcgagagccgagatcgtg
ctcgccacgaaacacgtggaaggtatccgctccatcaccgagataccggccaccgcctac
gcgccgcacgacggggtgatctacaacaacgagcgcctcttccacggcccagacctgcac
ggcatcgagcacgtcgacggctgctccgcgaagggtatcgccgcctcggtcaagggcgcg
cccgcgccgggcaaatggatccgccgccccttgaggagcgcctggctcacagacccgctg
gtcatggacagcgccttccagatgatgatcctctggagcttcgagcgcttcggcgccgga
tcgctcccctgcttcgccgggcgctaccgccagttccaggaatccttcccgaaggaagga
gcccaggtggtcatccgcgtcacctccgagaacccgcgcggcgccagcgccgacatggaa
ttcctggaccgcaacaccggcaagctcgtagcgcgccttgagggatacgagtgcgtcatc
gacccgtccctcaagcaggccttccagcgtaacaagctgcggaccgtttccgttgcactg
ggggcggcatag
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