Geomonas oryzisoli: KP004_07960
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Entry
KP004_07960 CDS
T07282
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ger02022
]
KP004_07960
Two-component system [BR:
ger02022
]
NtrC family
Unclassified
KP004_07960
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_16
AAA_2
AAA
DZR_2
HTH_17
AAA_22
RWP-RK
MCM
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QWV95100
LinkDB
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Position
1790772..1792157
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AA seq
461 aa
AA seq
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MTVTELSLSGALVVGLSTQLSEIFAIRPVIPGTGEVELLAKLVRQGRGGAAIRLFYSDHD
TMQALWEHIRDNLPRTDSCPYCGHPDDSREGSCDKCSLYLNFAKKNYLERHIENTFAQRL
NIRLSRLNLEHIQKIIHFVDSKLLKIQHRSPDKEFVGTSPAMLSVFSMIRKVAPTEMSVL
LLGESGTGKELTARSLHHLSTRRDGPFVAVNCAAIPETLLEAELFGYEKGAFTGAYVTKK
GKFESADGGTLFLDEIGDLPASLQAKLLRFLEDRLVQPVGSAHSKKIDVRIVAATNCDLQ
RAIGQGHFRTDLFYRLNSFTIKLPPLRDRGDDKVRLARYFLEKFSRSENRPMEFSDGALD
AIRSHAWPGNVRELENKVRRGFLMAPGKVIDPECMELDQVEDAATVPEPVFRPGASQKEY
VIQVLEQNDYVIARAARQLNISRPSMYALIRRHGINRDNVK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtcacagagctcagcctcagcggcgcgctggtggtcggcctttccacccaactg
agcgagatcttcgccataaggccggtcattcccggcacaggcgaggtggaacttctggcc
aagctggtgcggcaggggaggggcggcgccgccatccgcctgttctactccgaccacgac
accatgcaggccctttgggaacacatcagggacaacctcccccggaccgattcctgcccc
tactgcggccaccccgacgattcccgcgaagggtcctgcgacaagtgcagcctctacctc
aactttgccaaaaagaactaccttgaacggcacatcgaaaacaccttcgcccagcgcctc
aacatccgcttgagccggctcaacctcgagcacatccagaaaatcatccacttcgtcgac
tccaagctgctgaagatccagcatcgctcccccgacaaggagttcgtcggcaccagcccg
gcgatgctgtccgtcttttccatgatccggaaggtggcgcccaccgaaatgagcgtgctc
cttctgggggagagcgggaccggcaaggaactgaccgccagaagtctgcaccacctcagc
acgcgcagggacggcccctttgtcgccgtgaactgcgccgccatacccgaaacccttctg
gaggccgagctgttcgggtacgagaagggggcgttcaccggggcctacgtcaccaagaag
ggtaaatttgaatcggccgacggcggcacgctgtttctggatgagatcggggaccttccg
gccagcctgcaggcgaaactgttgcgctttctcgaggacaggctggttcagccggtcggc
tccgcgcactccaaaaagatcgacgtgaggatcgtcgccgccaccaactgcgacctgcag
cgtgccatcggccaggggcatttccgcaccgacctcttctaccggctcaactccttcacc
atcaagctcccccccttgcgggataggggagatgacaaggtgcggctggcgaggtacttc
ctggaaaaattctcccgtagcgaaaaccggcccatggaattctccgacggtgccctggac
gccatccgcagccacgcctggcccggcaacgtcagggagctggagaacaaggtgaggagg
gggttcctcatggcgccgggcaaagtaatcgacccggagtgcatggaacttgaccaggta
gaggacgccgcaacggtgccggagccggtcttcaggcccggggcatcccagaaggagtac
gtcattcaggtgctggaacaaaacgattacgtcattgcgcgggccgcccgccagctgaac
atcagccgccccagcatgtacgccctgatcaggaggcacggaatcaacagggacaacgtg
aaatag
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