Geomonas oryzisoli: KP004_19435
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Entry
KP004_19435 CDS
T07282
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ger
Geomonas oryzisoli
Pathway
ger00010
Glycolysis / Gluconeogenesis
ger00020
Citrate cycle (TCA cycle)
ger00620
Pyruvate metabolism
ger00650
Butanoate metabolism
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
ger01120
Microbial metabolism in diverse environments
ger01200
Carbon metabolism
ger01210
2-Oxocarboxylic acid metabolism
Module
ger_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KP004_19435 (nifJ)
00020 Citrate cycle (TCA cycle)
KP004_19435 (nifJ)
00620 Pyruvate metabolism
KP004_19435 (nifJ)
00650 Butanoate metabolism
KP004_19435 (nifJ)
Enzymes [BR:
ger01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
KP004_19435 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_9
Fer4_8
Fer4
Fer4_21
Fer4_16
Fer4_10
Fer4_17
Fer4_6
Fer4_2
Transketolase_C
Fer4_4
Fer4_13
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
QWV93311
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All DBs
Position
4462425..4466147
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AA seq
1240 aa
AA seq
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MSGTRKTMDGNTAAAHVAYALSETAAIYPITPSSTMGEVADEWAAEGRKNIFGQTLNIKE
LQSEAGAAGAVHGSLVAGALTTTFTASQGLLLMLPNMYKIAGEQLPGVFHVSARAIATHA
LSIFGDHQDVMAARPTGFAMLCSSSVQEVMDLALVAHLAALEGSLPFLHFFDGFRTSHEV
QKIEVIDYEEMARLVNYEKLAAFRSKAMNPEHPELRGTAQNPDIYFQGRERANPFYQALP
QVVIETMERVGQLTGRHYRLFDYVGHAEADRVIISMGSSCETVEEVVQYLNGKGEKVGLV
KVRLYRPFASELLLAAIPVSAAKITVLDRTKEPGSLGEPLYQDVCTAFLERGGEIPELYA
GRYGLGSKEFRPVHVKSIFENMNGRPGKRHFTVGITDDVSDSSLPVEGTLSTTPEGTIQC
RFWGMGADGTVGANKAAIKIIGDNTDLYVQAYFSYDSKKSGGITVSHLRFGESPIQSTYL
VDAADFISCQKAPYVQIYDLLEGIREGGTFLLNSPWSSVEAMEANLPATMRRAIAQKKVR
LYNVDAISIAQAAGLGGRINMIMQTAFFKLSGVLPFERAVELLKDSIRKEYGRKGEQVVE
MNLAAVDLAVESLVEIHYPDSWQQADDERGTDFRLKQPMPDYMRDMVFPILRQKGDDLPV
SSFTPDGVFPFSTARYEKRGVAINVPEWIKENCIQCNQCAYICPHATIRPFVATDGELAG
APETYQTIPVNARELKGMGFRIQVYPLDCMGCGNCADICPAKVPALVMKPIDTQAAVQEQ
NRAFAETLSPKGHLVKRTTVIGSQFQQPLLEFSGACSGCGETPYARIITQLFGERMMIAN
ATGCSSIWGASAPVSPYCANADGHGPAWNNSLFEDAAEFGFGYHMAVSQRRHLLADQVRR
AVHSLPEGELREELEGWLAGMMDPELSRRHGDRLKELLPKAGDNELLQQIAAGADLFTKK
SIWIYGGDGWAYDIGFGGLDHVISTGEDVNLLVMDTELYSNTGGQCSKATQLGAIARFAA
SGKRTSKKDLGRMAMTYGYVYVASIAIGADKNQTLRAIAEAEAYPGPSLIIAYSTCINQG
LRKGMGKSIEESQLAVRSGYWPLYRYNPLLKQEGKNPFILESKKPDGSLADFLSGEVRFQ
ALEKQNPEVARQLREQMEQEALERFRMFRDMADWQPSKGDVPKEGGRDHQHVPAAAGAAE
EPTPVCVSATSDPRYSRPGEPEEECDDGRAGIDKNINEPD
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaccaggaaaacgatggacggcaacacggcagcggcgcacgtcgcctacgcg
ctcagcgaaacggcggccatatatccgatcaccccttcctcgaccatgggggaagtggcg
gacgagtgggcggcggaaggtcgcaagaacatcttcgggcagaccttgaacatcaaggag
ctgcagtccgaggcgggggcggccggggcggtccacggttcgctggtggcaggggcgctc
accaccaccttcaccgcttcgcaggggctgttgctgatgctgcccaacatgtacaagatc
gccggtgaacagctcccgggggtgttccacgtttccgcgcgcgccatcgccacccacgcc
ctctccatcttcggcgaccaccaggacgtcatggccgcccgtcccaccggcttcgccatg
ctctgttcctcctcggtccaggaggtaatggatctcgccctggtggcgcacctggccgct
ttggagggaagccttcccttcctgcacttcttcgacggcttccgcacctcccacgaggtg
cagaagatcgaggtgatcgattacgaggagatggcccggctggtgaactacgagaagctg
gcagccttccgcagcaaggccatgaaccccgagcaccccgaactgcggggcacggcacaa
aaccccgacatctacttccaggggcgcgagcgcgccaaccccttctatcaagcgctgccc
caggtagtgatcgagaccatggaacgggtggggcagctcacgggacggcactaccgtctc
ttcgattacgtggggcacgccgaggcggaccgggtcatcatcagcatgggatcgtcctgc
gaaaccgtggaagaggtggtgcaatacctgaacgggaaaggggagaaggtggggctggtc
aaggtgcggctctaccgtcccttcgcctcggagctcctgctcgccgcgatccccgtctcg
gcggccaagatcacggtgctcgaccgcaccaaggagcccggttccctgggcgagccgctc
taccaggacgtctgcaccgcgttcctggagcgcggcggcgagatccccgagctctacgcg
gggcgctacggcctgggctcgaaggagttccgcccggtacacgtgaagagcatctttgag
aacatgaacggccgccccggcaaacgccacttcaccgtcggcatcaccgacgacgtgagc
gacagctcgctcccggtcgagggaaccctctccacgaccccggaggggactatccagtgc
cgcttctgggggatgggagccgacggcaccgtcggggccaacaaggctgccatcaagatc
atcggcgacaacaccgacctctacgtccaggcctacttttcctatgattccaagaagtcc
ggggggatcaccgtctcccacctgcgcttcggcgaaagcccgatccagtccacgtatctt
gtcgacgccgccgatttcatctcctgccagaaagccccctacgtgcagatctacgacctg
ctggaggggatcagggaggggggcaccttcctcttgaattcaccctggagcagcgtggag
gcgatggaggccaacctcccggccaccatgcgccgtgccatcgcgcagaagaaggtccgc
ctctacaacgtggacgccatcagcatcgcccaggcggcagggctcggggggcgcatcaac
atgatcatgcagaccgccttcttcaagctctccggcgtgcttcccttcgagcgggccgtg
gagctcttgaaggactcgatccgcaaggaatacggcaggaaaggcgagcaggtggtggag
atgaaccttgccgcggtcgacctcgccgtggaaagcctggtcgaaatccactaccccgac
tcctggcagcaggccgacgacgagcgcggcaccgacttcaggctgaagcagccgatgccc
gactacatgcgcgacatggtgttcccgatcctgcgccagaagggggatgacctccccgtt
tcctccttcacgcccgacggggtcttccccttctccaccgcgcgctacgagaaaaggggc
gtcgccatcaacgtccccgagtggatcaaggaaaactgcatccagtgcaaccagtgcgcc
tatatctgcccgcacgccaccatccgccccttcgtggccaccgacggggagctggcgggg
gcgccggagacctaccagaccattccggtcaacgcgcgggaactcaagggaatgggcttt
aggatccaggtctaccccctggactgcatggggtgcggcaactgcgccgacatctgcccg
gccaaggtcccggcgctggtcatgaagccgatcgacacccaggccgccgtgcaggagcaa
aaccgggccttcgccgagacgctgtccccgaaagggcacctggtgaagcggaccaccgtg
atcggcagccagttccagcagccccttctcgagttctccggcgcctgctccggctgcggc
gagaccccctacgccaggatcatcacccagctcttcggggagcgcatgatgatcgccaac
gccaccggctgcagctcgatctggggggcctccgccccggtctccccctactgcgccaac
gccgacgggcacggtcccgcctggaacaactcgctcttcgaggacgccgccgaattcggc
ttcggctaccatatggccgtttcccagcgcaggcacctcctggccgaccaggtgcgccgg
gccgtgcacagcctgccggaaggggagctgagggaagagctggaagggtggctggccggt
atgatggacccggaactctcccggcgccacggcgaccggctgaaggagctcctccccaaa
gccggggacaacgagctcctgcagcagatcgccgccggtgcggacctcttcaccaagaag
tcgatctggatctacggcggcgacggctgggcctacgacatcggcttcggcggcctggac
cacgtcatctccaccggcgaggacgtgaacctcctggtgatggataccgagctctactcc
aataccggcgggcaatgctccaaggcgacccagttgggcgccatcgcccgcttcgccgcc
tccggaaagaggacatcgaagaaggacctcgggcgcatggcgatgacctacggctacgtc
tacgtcgcctccatcgccatcggcgccgacaagaaccagaccctgcgcgccatcgccgaa
gccgaggcctaccccggcccgtcgctcatcatcgcctactccacctgcatcaaccagggg
ctcaggaaagggatggggaaatcgatcgaggaaagccagctcgcggtgagatccgggtac
tggccgctgtaccgctacaacccgcttctgaagcaggaagggaagaacccgttcatcctg
gaatccaagaagcccgacggctcgctcgccgacttcctctccggagaggtgcgtttccag
gccctggaaaagcagaaccccgaggtggcacggcaactgcgcgagcagatggagcaggag
gcgctggagcggttccgcatgttccgggacatggccgactggcagccgagcaagggggac
gtacccaaagaaggaggaagggatcatcaacacgtccccgcggccgcaggagccgccgag
gaaccgacgccggtctgtgtcagcgcaaccagcgacccgcgctacagccgccccggcgag
cccgaggaggaatgcgacgacggccgtgccgggatcgacaagaacatcaatgaacccgat
tag
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integrated database retrieval system
