Gemmata sp. SH-PL17: VT84_00870
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Entry
VT84_00870 CDS
T04358
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ges03009
]
VT84_00870 (rsmB)
Enzymes [BR:
ges01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
VT84_00870 (rsmB)
Ribosome biogenesis [BR:
ges03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VT84_00870 (rsmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
FtsJ
Methyltransf_31
Ubie_methyltran
Methyltransf_25
AlkZ-like
Motif
Other DBs
NCBI-ProteinID:
AMV22930
UniProt:
A0A142X941
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Position
211197..212756
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AA seq
519 aa
AA seq
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MTITARQVAADVLNRSRSRDGFAAELIDDVLNKAALTPQDRRFVTQLVFGVIRRSGTLDA
ILKPFIQLPFHAVQPRVWDLLRLGAFQLTFLTHVPKHAAVNETVELAPYVGALKAKGFVN
GVLRRVSELVTDDFTDKPGAGAVAFGWESLPTSSFFSRRGEQTRDAGISPPSFLGKGAGG
LGSDSSPSPIPPLNGEGLKTADGSRPLFLREESGRGSYRRLARSVLPDPVADPTGYFAAA
FSFPQWLANRWIERYGPAECTRLGFWFNAPPPLWIRVNKLNASRESYRVQLAGQTIEAAP
GAHPQSLLFPEHHAIRDLPGFAAGDFAVQDHSSMLVASALGVKSGMRVLDACAAPGGKTT
HLMELMDNRGHITACDIEAKRLQTVTTLCQRLGIQEVETVLLKEDGELPPGPFDAALVDV
PCSNTGVLGRRPEVRWRLKPNEFEHLIRLQTRLLILAAERVKPGGAVVYSTCSIEPDENE
GVVRAVCRGMRSLALEAEHTSVPGRPSDGGYWARLRKAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacgattaccgcccgacaggtcgcggccgacgtgctaaatcgctcgcgttcgcgcgac
gggttcgcagccgaactcatcgacgacgttctcaacaaggccgcactcacgccccaggac
cgccgcttcgtcacgcaactggtgttcggcgtgatccggcgcagcggaacgcttgatgcg
attctgaagccgttcattcagcttccgttccacgcggttcagccgcgcgtgtgggacttg
ctccggcttggcgcgtttcagctcacgtttctcacgcacgttcccaagcatgcggccgtc
aacgaaacggtcgaactcgccccctacgtcggtgcgctgaaagccaaaggtttcgtgaac
ggcgtgctgcgtcgcgtgtcggagctggtgacggacgacttcacggacaaaccgggcgcg
ggcgccgtggcgttcgggtgggaatcgctccccacgtcctcctttttttcaaggagggga
gagcaaacgcgcgacgcaggtatttctcccccttccttcttagggaagggggctgggggg
ttaggttctgactccagcccctccccaatccctcccctaaacggagaggggcttaaaacc
gccgatggttctcgccctctcttcttaagggaggagtcggggcgcggttcttaccgccga
ctcgcgcggtccgttctccccgatcccgtcgctgacccgacggggtacttcgcggcggcg
ttttcgttcccacagtggctcgcgaaccggtggatcgagcgctatggcccggccgaatgc
acgcgactcggcttctggttcaacgcgcctccgccgttgtggattcgcgtgaacaaactg
aacgcgagccgcgaatcgtaccgcgttcagctcgccgggcagacgatcgaagcagcacca
ggagcgcacccgcaatcgctgctgttccccgagcaccacgcgatccgcgatctcccgggg
ttcgccgcgggcgacttcgcggtccaggaccattcgtcgatgttggttgcgtccgcgctc
ggggtgaagtccgggatgcgcgttctcgatgcgtgcgcggctcccggcggcaagacgacg
cacctgatggaactgatggacaatcggggccacatcaccgcctgcgacattgaggcgaag
cgcctccaaacagtaaccacgctgtgccagcggctcgggattcaggaggtagaaacggtt
ctactcaaggaggatggtgaattgcccccgggaccgttcgatgccgcgctggtcgatgtg
ccgtgtagcaacacgggggtattgggtcggcgccccgaagtgcggtggcgcctgaaaccg
aacgagttcgagcacctcatccgcctacaaacacggttactcatcctcgcggccgaacgg
gtcaaaccgggcggtgcggtggtgtactcgacgtgcagcatcgagccggacgagaacgag
ggcgtcgtgagggccgtgtgccgcggaatgcggagcctggcgctcgaagcggaacacacc
tctgtgcccgggcgcccgtccgacggcggctactgggcgcggctccgtaaagcgaagtga
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