Gemmata sp. SH-PL17: VT84_07865
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Entry
VT84_07865 CDS
T04358
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00521
Streptomycin biosynthesis
ges00523
Polyketide sugar unit biosynthesis
ges00541
O-Antigen nucleotide sugar biosynthesis
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
ges01250
Biosynthesis of nucleotide sugars
Module
ges_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VT84_07865 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VT84_07865 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VT84_07865 (rfbC)
Enzymes [BR:
ges01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
VT84_07865 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AMV24297
UniProt:
A0A142XB71
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All DBs
Position
complement(1842323..1842856)
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AA seq
177 aa
AA seq
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MRFLSTELPGVFVIEPEPRADDRGLFARTYCRDEFAAHGLCTDWVQCNVSFNTRAGTLRG
MHWQSAPHEEVKLVRCTSGAALDVIADPRPDSPTYRKWVAVEITAENRRAVYIPGGLAHG
FQTLADGTELFYQMSAFYVADAARGARWDDPALGIAWPACAQRVIAPRDLSFPDLPI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttctctccaccgagttgccgggcgtgttcgtgatcgagccggagccgagggcc
gacgatcgcggactgttcgcgcggacgtactgccgcgacgagttcgccgcacacggtctc
tgtaccgactgggtccagtgcaacgtgtcgttcaacacgagggccggcacgctccgcggg
atgcactggcagtccgcgccgcacgaagaggtgaagcttgtgcgctgtacgagcggcgcg
gctctcgacgtgatcgcggacccacggcccgattcgccgacgtaccggaagtgggtcgcg
gtggagatcaccgcggagaaccggcgagccgtgtacattccgggcgggttggcgcacggg
ttccaaacgctcgccgacgggaccgaactgttctaccagatgtccgcgttctacgtcgcg
gacgcggcccgcggcgcccgctgggacgacccggcgctgggcatcgcgtggccggcgtgt
gcgcagcgcgtcatcgccccccgcgacctgtcattcccggatctgccgatatga
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