Gemmata sp. SH-PL17: VT84_34875
Help
Entry
VT84_34875 CDS
T04358
Name
(GenBank) Carbohydrate-selective porin, OprB family
KO
K07267
porin
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ges02000
]
VT84_34875
Transporters [BR:
ges02000
]
Other transporters
Pores ion channels [TC:
1
]
VT84_34875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AMV29631
UniProt:
A0A142XRN4
LinkDB
All DBs
Position
complement(8117158..8118594)
Genome browser
AA seq
478 aa
AA seq
DB search
MRKLYFGLLATVAVGLTHTGRGAAQNPPPAVLPDGLPTAVPADPLTVTQPPAPQPGAPGA
FDALQGITGCAPAEPPTPPAPPPYGGPFLERQKLLGGWFGARERLRDHGVTLDIHSTNII
SDLANGGLRESFQQRGRIDYLMHVDGEKAGLWKGSFIDLHAEMAYGTAISGYTGALEPAN
IAQILPTPNGYVGALTGVKFTQALSERFITFFGKINTAEAFNQPFTGGALGVDGFMNGGL
TIPAVFVRTIPYSTYGAGFAYLKGAEPVFSFSLFDANNTPTRDGFDTFFDNGVVFVPQVN
VPTKFFGLPGHQGLTGSYSTKRYTIIDRTAFINPILGLTAPTKSGSWALSYNFDQTLYVA
PDNPKRSWGTFGNLGLADQNPSPFRWFANIGFGGSSPIASRKLDTFGVGYYYLGLNNALQ
NLAPRLLPFRDHEQGVEMFYNCAVTPWCHLTPDVQFVIPAQKRADALTVFGLRAKIDF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaactctatttcggcttgctggcgacggtcgccgtgggcttaacacatacggga
aggggggcggcccagaacccgcccccggccgtgttacccgacgggctcccgaccgcggtt
ccggcagacccactcacggtcactcagccccccgcacctcaacccggcgcgccaggagcg
tttgacgcgctccagggcattacgggctgcgcgcctgcggaaccaccgactcctcccgcg
ccgccaccctacggcggcccgttcctggagcgccagaagttattaggcggttggttcggt
gcacgggagcgcctgcgcgatcacggtgtgactctcgacattcactcaacaaacatcatc
agcgacttggccaacggtgggctgcgtgagagcttccagcagcgcgggcgcatcgactat
ctgatgcacgttgacggcgagaaggccggattgtggaagggatcgttcatcgatctgcac
gcggaaatggcatacggcaccgcgatcagtgggtacaccggcgctctggaaccggcgaac
atcgcgcagatcctgcccactcccaacgggtacgtcggcgccctgactggagtgaaattt
acacaggctttatcggaacggttcattaccttcttcgggaagattaacacggccgaggcg
ttcaaccagccgttcaccggcggcgcgctcggggtcgacgggttcatgaacgggggcctg
acgatcccggccgtgttcgtgcgcaccatcccgtactcgacctacggtgcgggctttgcg
tacctcaagggtgccgaaccggtcttctcgttcagcctcttcgacgcgaacaacacgccg
acgcgcgacgggttcgacacgttcttcgataacggtgtggtgttcgtcccgcaggtcaat
gtcccgaccaagttcttcggacttcccgggcaccaggggctcaccgggtcttacagcacc
aagcggtacaccattatcgaccgcacggcgttcatcaacccgatcctcgggctgaccgcg
ccgaccaagagcgggtcgtgggcgctgtcgtacaacttcgaccagaccctctacgtcgcc
ccggacaacccgaagcgctcgtggggtacgttcgggaacctcggcctcgcggaccagaac
cccagcccgttccgatggttcgcgaacatcggtttcggtgggagcagtcccatcgcgtcc
cgcaagctcgacacgttcggcgtcgggtactactacttggggctgaacaacgcccttcag
aacctcgccccgcgcttgttgcccttccgcgaccacgagcaaggggtcgaaatgttctac
aactgcgcggtgaccccgtggtgccacctcaccccggacgtgcagttcgtgatccccgca
caaaaaagagccgatgccctgacggtcttcggccttcgcgcgaaaatcgatttctga
DBGET
integrated database retrieval system
