Geothrix oryzae: GETHOR_28200
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Entry
GETHOR_28200 CDS
T09137
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gex
Geothrix oryzae
Pathway
gex00521
Streptomycin biosynthesis
gex00523
Polyketide sugar unit biosynthesis
gex00541
O-Antigen nucleotide sugar biosynthesis
gex01100
Metabolic pathways
gex01110
Biosynthesis of secondary metabolites
gex01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GETHOR_28200 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GETHOR_28200 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GETHOR_28200 (rfbC)
Enzymes [BR:
gex01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GETHOR_28200 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BDU70719
UniProt:
A0AA48GGY2
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Position
complement(3152242..3152814)
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AA seq
190 aa
AA seq
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MNFLETPIPGAMVIEADRYEDDRGFFARVYCEQAFRLAGLPVIWPQSSSVWNRRKGTLRG
LHFQDAPHQEAKLVRCAVGRIFDVIVDLRPGSPTYRKWWGVELSRENMRTLFVPMGLAHG
YQTLADDTEIHYMISALHVPGAARGIRWDDPELGIPWPQENPVLSERDRIWPDLGTWHAG
KLRAKEEHHD
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaactttctggagacgccgattcccggggccatggtcatcgaggccgaccggtacgag
gatgaccggggatttttcgcccgggtctattgtgagcaggccttccggctggcgggactg
cccgtgatctggccccagtccagcagcgtgtggaatcggcggaagggtaccctccgggga
ctgcacttccaggacgcaccccaccaggaagccaagctggtgcggtgcgcggtggggcgg
atcttcgatgtcatcgtcgatctccgtcccgggtcgcccacctaccgcaagtggtggggt
gtggagttgagccgtgaaaacatgaggaccctcttcgttcccatgggtctcgcccacggc
taccagacgctggcagatgacacagagatccattacatgatctcggccctccatgtcccc
ggggcggcgcggggcatccgctgggatgatccggagctcgggatcccttggccccaggag
aacccggtgctgtccgaacgggatcgcatctggccagacctcggcacatggcatgcgggc
aagctgagggcgaaggaggaacaccatgactga
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