Gluconobacter frateurii: MKW11_04485
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Entry
MKW11_04485 CDS
T08020
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
gfa
Gluconobacter frateurii
Brite
KEGG Orthology (KO) [BR:
gfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfa03019
]
MKW11_04485 (hrpB)
Enzymes [BR:
gfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MKW11_04485 (hrpB)
Messenger RNA biogenesis [BR:
gfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MKW11_04485 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UMM09936
LinkDB
All DBs
Position
complement(958437..960884)
Genome browser
AA seq
815 aa
AA seq
DB search
MLPELLSVLEQQPNAVLVAPPGAGKTTLTPLALLDVPWLAGQKIILVEPRRVAVRGAASR
MASTLGERPGETVGFRTRTDSAVSSRTRIEVVTEGLLVRRLLADPTLDGVGAVLFDEVHE
RSLDLDAALAFCLDLQRELRPDLRILAMSATPDGRAFTTLMNAPLIESEGRQYPIDVRHT
RDISHPRDLPEACARAIRQAWSEEEGDILAFLPGVGEIRRTQALLGESVPVFPLHGEQTT
EDQDRAIAPSGVRRVVLATSIAETSVTVSGVRIVVDGGLRRAPRLDPNTGLSRLETLKIS
RATATQRAGRAGRQSPGVAIRLWSEATQRALRPQDAPEILVADLTDFALVTAAWQDVMGT
SPDDLPLLDAPPAGVLKGGRELLSDLGAINAAGHITPLGKRMAGLGTHPRLAAMLCAAKT
IPERVTGACLAALLEERDPLRPRPNTPAGASAGADIRTRLALFERDDPRADRASLFHMRQ
SAKRFLRRMGGKDLPLSPMPLHAGPLLAAGFPDRVAQAAGELGRFRLAGGGSARVSANDG
LAREKLLAAAAFHTRTSTEITLAAPLDAENLPQTLLDRTTEQVETSLDGASGRIIARRRL
RLGALILRDRNTEVTPEEAQALLLQQIQSDLARALDWSDASQQFQARVAHARATYAPHLP
DLSPEALAQGLEWLEPYLAGCDRLTQVKALDILSILRAQLDYADLSALDRKLPSRLTLKA
STHEIDYTGAIPTVSARAQAFYGTAGTPVLADGQVALQCALLSPAGRPQAITADLAGFWK
GSWSDMRKDMRGRYPRHDWPEDPATAEPPKPRPKR
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
attcttccagagcttctgagcgtacttgaacagcagcctaacgctgttctggtggctccc
ccgggcgccggtaagacgacgctgacgccattggcgctgctcgatgtcccatggcttgcc
gggcaaaaaattattcttgtcgaaccgcgccgtgttgccgtgcgcggtgccgcatcccgg
atggccagcacgctcggtgaacgtcctggtgagactgttggcttccgaacccgcacagat
tctgctgtttccagccgcacgcgcatcgaagtcgtgacggaagggctgcttgttcgccgc
cttctggcagacccgacacttgatggcgttggtgctgttctgttcgatgaagttcatgaa
cggtcgctggatctggatgccgcactggctttctgtctggatcttcaacgcgaactgcgg
ccggatctgcgtattctggcgatgtccgcaacgccggatggccgcgctttcacaaccctc
atgaacgcccccctcatcgagagtgaaggccggcagtacccgattgatgtccggcacacc
cgtgacatctcgcacccccgagatctgccggaggcctgtgcccgagccatccgacaggcc
tggtcggaagaagagggcgatattctcgccttcctgccaggtgttggtgaaattcgccgg
acgcaggcgctgcttggggagtccgtgcctgtttttccgcttcatggtgaacagacaacg
gaagatcaggatcgcgcgattgcaccgtccggtgtccgccgcgtcgtgctggcaacgtcc
attgcggaaacatccgtgacggtttcgggcgtcaggattgtcgtggatggtggccttcga
cgggcgccccgtctggacccgaacactggtctatctcgtctggaaaccctgaaaatttcc
cgcgcgacagcaacccagcgggccggacgtgcaggccgacagtcgcccggtgtcgcaatt
cgtctctggtctgaagccacacagcgcgcgttgcgtccgcaggatgcgcctgaaatcctt
gtcgcagacctgacggattttgcccttgtaactgcggcctggcaggacgtcatgggcacg
tctcctgatgatctgcctttgctggatgcgccgcctgcgggggtcctgaaaggtgggcgc
gaactgctctctgaccttggagctattaacgcagcagggcacatcacaccgctcggaaaa
cggatggccggattgggaacccatccgcgcctggccgccatgctctgtgcggcaaagacc
attcctgaacgtgtcacaggcgcctgccttgcagcacttctggaagagcgcgatcccctt
cgcccaagaccgaacacacctgcaggtgcttcggctggagcggacatccgcacacgtctg
gctctttttgaacgcgatgatccccgtgccgaccgggccagcctgtttcacatgcgtcag
tccgccaagcgcttcctgcgccggatgggcgggaaagatctgcctcttagtccgatgcct
ttgcacgccggaccactgttggcggccggttttccagaccgtgtggcgcaggccgctggt
gaactagggcgctttcgcctcgctggcggaggaagcgcgcgggtctcggccaatgatggt
ctggcacgggaaaagctgttggctgccgctgccttccatacccggacgtccacggaaatc
accttggccgcgcctctggatgcggaaaatctgccccagacgctgctggaccggacgact
gaacaggtggagaccagtctggatggtgcctccggacgcatcatcgcccggcgccgtctt
cgtcttggcgcgctgattctgcgagaccgcaatacggaagtaacgcctgaggaagcacag
gcgctcctgctccagcagatccagtccgatctggcgcgagccctcgactggtccgacgcg
agccagcagtttcaggcccgcgtcgctcatgcccgggcaacctatgcgccacatctgccc
gacctgtccccagaggctctggctcaaggcttggaatggctcgaaccctatctagcgggc
tgtgaccgtttaacgcaggtcaaggcgctggatattctgtccattctgcgtgcgcaactg
gactacgctgatctgtcagcattggatcgcaaattaccatcacgtctgacgctgaaagcc
agcacgcacgagattgattacacgggcgcgattccgacagtgtccgcccgtgcacaggcc
ttctacggaacagccggcacgcctgttctggccgatggacaggtcgcgcttcaatgcgcg
ctcctgtcgcccgccggtcgtccgcaggcgattacagctgatctggcaggcttctggaaa
ggaagctggtccgatatgcgcaaagatatgcgcggccggtaccctcggcatgactggccg
gaagatccggcgaccgctgagcctccgaagccaaggccaaagcgttag
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