Christiangramia forsetii: GFO_0416
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Entry
GFO_0416 CDS
T00448
Name
(GenBank) protein containing peptidoglycan binding-like domain
KO
K21470
L,D-transpeptidase YcbB
Organism
gfo
Christiangramia forsetii
Brite
KEGG Orthology (KO) [BR:
gfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfo01002
]
GFO_0416
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gfo01011
]
GFO_0416
Peptidases and inhibitors [BR:
gfo01002
]
Cysteine peptidases
Family C82
GFO_0416
Peptidoglycan biosynthesis and degradation proteins [BR:
gfo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GFO_0416
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
DUF6775
Motif
Other DBs
NCBI-ProteinID:
CAL65401
UniProt:
A0LYF6
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All DBs
Position
complement(493100..494731)
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AA seq
543 aa
AA seq
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MQRPIFIFAIIGLLLLSACKNNKEEPGIEERNEVEEITFLTEADRIEDFLEDFDTGTTEL
YNATKVSDFYKKNDFQPIWSKRELREDLFRNIENIEDEGLFFEDYHGERLQKLLSSLDTN
AEVDNDLLELLLTDSYLRLAKDLATGKLDPTKIHEIWGTPLNTIDAEKVLEKAISEGNIH
KSLDSLKPDHLVYHQLKSALNKFKKNGIEEGPTTKISTGKLIRPGDNSDRMPSIAKRLSE
LGYFNGISDSTNTIYNEDIQKAVKEFQLDHDLQEDALLGSTTISNLNLTRRDRYHQILVN
LERWRWYPKNLGKHYIIVNIPDYELSVIKEEDTIRTHKIMVGTEVRKTPIFSDEIGYIIY
NPTWTIPPTIKKNDVIPGAKKDIGYFQKKNIKIYDSEGTDVDPASVDWNSSKARGYTYRQ
PAGPTNPLGIVKIIYPNEYLIYLHDTPSRSLFEKNARAQSSGCVRVQDALGLAKYLLSDQ
DSYDDEKIEEILKSGKTTQITVKQKVKVHHFYWTVYQKKDAIKFIDDIYNLDQKTWDLLK
PEA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgccccatatttatatttgccattattggcctgcttcttctttccgcatgtaaa
aacaataaggaagaaccgggtatagaagagcgcaatgaagttgaagaaataacttttctt
actgaagcagataggattgaagattttctggaagattttgataccggaacaacggaactt
tacaatgcaactaaagtatctgatttttataaaaaaaacgattttcaaccaatttggtct
aagcgcgaattgagagaagatctttttagaaatatagaaaatattgaagacgaaggatta
ttctttgaagactatcatggggaaagacttcaaaaattactaagctctttagacaccaat
gctgaagtagataatgacttacttgaattacttcttacagactcttacttaagacttgca
aaagatctcgccacgggtaaattagacccaaccaaaattcatgaaatctggggcacgccg
ctaaatacaattgatgctgaaaaggtcctggaaaaggcaatttcagaaggaaatattcat
aagagtttagattctttaaaaccagaccatcttgtatatcaccaattaaaatcagcttta
aataagttcaagaagaacgggattgaagaaggcccaactacaaaaataagtaccggaaag
cttataagaccgggagacaacagcgacagaatgccttctatcgccaaaagactttctgag
cttgggtattttaatggaattagtgattctacaaacacgatctacaatgaagacatacag
aaggcggtaaaagaatttcaacttgatcatgatcttcaggaagatgctcttcttggcagc
accacaatttcaaatttaaatttaaccagaagagatcggtatcaccagattttagtgaac
cttgaaagatggaggtggtatccaaaaaatttaggtaaacactatatcatagtaaatatt
ccagattatgaattaagtgttataaaagaggaagataccataagaactcacaaaattatg
gtgggaacggaggttagaaaaactcctatcttttcagatgagattggctatattatatac
aatcccacctggaccattcctcctactatcaaaaagaacgacgtgatcccgggagcaaaa
aaagatatcgggtattttcagaaaaagaatattaaaatttacgacagcgaagggactgac
gtagacccggcaagtgtagattggaattcttctaaagccaggggatacacatatagacaa
cctgccggcccaacgaatcctctaggaattgtaaagatcatttatcctaatgagtatctt
atttatttgcatgacacgccctccagaagcttgttcgagaagaacgccagagcccaaagt
tctggttgcgttcgcgtccaggatgctcttggccttgcaaaatatcttttaagcgatcag
gatagctatgatgatgaaaagatcgaagaaattctgaaatcaggaaaaacaactcaaatt
actgtaaagcaaaaagtaaaagtgcatcatttctattggaccgtctatcaaaaaaaagat
gccatcaaatttattgatgatatctataatttggatcagaaaacctgggacttattaaag
cccgaagcctga
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