Geospiza fortis (medium ground-finch): 102032783
Help
Entry
102032783 CDS
T03755
Symbol
RPGR
Name
(RefSeq) retinitis pigmentosa GTPase regulator
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gfr03037
]
102032783 (RPGR)
Cilium and associated proteins [BR:
gfr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102032783 (RPGR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102032783
NCBI-ProteinID:
XP_014164056
LinkDB
All DBs
Position
Un
AA seq
1301 aa
AA seq
DB search
MVLPLNHRKVGLGRNLWRPSGPTLLVKQVQPEEVALHCVRAESGAVFTFGKSKFAEDIPS
KFWFKNDKPVLISCGDEHTAIITGKGKLYMFGSNDWGQLGLGSKNTVSKPTCVKALKPEK
PKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTMFHLISFFTNQHKIKQLSAG
SYTSAAVTEDGQLFVWGDNSEGQIGLAGEASVSVPCKVDIGKPVSFVSCGYYHSALITGD
GELYTFGEAVNGKLGLLPEQLKNNRVPQPVLGIMEKVNKVACGGEHTVVLTETDVYTFGL
GQYGQLGHGTFVFESSVPKPVKRLKRHKICNIACGENHTAVIAENGLMFTFGDGRHGKLG
FGEESFTNLFDPTLCYNFLKFTVLLVACGGCHMLVFAAPRPKGSEIPLEDLYEPRLTAAA
SQSRGDFVLANTLQLSAARMRRRERERSPEQFARMAQTLPAMGEGFLKSSLPVASNTSPF
WFSARSHPKAESGRDGDHEKENDHQKDKPSEVSSEQDSDNENIDRNLGDTTDILNMTHAM
KLNPGDWSLKLSPLQKQKKNNKNVKLKRDGKGGLKNKDSDFTKEGSKLESGSLQKQSSLS
ESTGQDLEKSSAFVGKPEARKSIKKGKSEHAQSDSTLKSGAQEITEDKSILVKREKECVE
NPEFFREDARYNLPTENQILTEKINSSNKKSKAVKSKQSLKIEVLPSAPRDQPQADSLIV
QEYSPVKKQGSQKTADSQNKLKDGVEKSDKCERINVTGEESSAEQKELKKKHQILKQVSV
TSSSSSSSTEESTNDLQKYILKEEAFYEHTVVQGARRTVTHMDLEKDSEIEEMQATNNEK
EHVEQTDLKSLNEEETSSDAKPDEDRLLEIKNEEESDQEQENESSEKGESEKEKLDETID
SEGKLGQEEESEVKNDRDEVSVEKDEEGKDNEEENEQEESQTERESGNEGAEETEEVSQQ
DGKEQRDEQGRLMEEEEMVSEGEKEDMEEKYEKEEGTEKDKEQGGEDAEEGEEKEVEAEE
EEVSEEEQVEEDANTETKEVGEDGVEEGKDGEDEVEEERGGEKEEGTEAEGDKGQEDEKE
EEEGENEEKGEDKEEGEGVEEDEGVGDEEESVGEDEGKEGVEEEEEDEEEEEGVEEGGDE
ETGEEEEEVEEGEEAGQEEGEGEDEGEGEEEEEEKEEEGEQEEEKEEEGEEEEEKEEEGE
EEEEEEEGEEEEGEEDEGEEEEGEEEKGEEGEEAEEGEEGEEGEGEEEEGKSKARKPEKT
ESASLPNSSKQNVKSKRHVANGLHNPEQFWNNVLPHYLTLK
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggtcttaccactgaatcacagaaaggttgggcttggaagaaatctctggagaccatct
ggtccaaccctcttggtaaagcaggttcagccagaggaggttgcactgcattgtgtccgg
gcagagtcaggtgctgttttcacattcgggaaaagcaaatttgcagaagatattcctagc
aagttctggttcaaaaatgacaagcctgtacttatatcatgtggagatgaacatacagct
attattacagggaaaggtaaactctacatgttcggcagtaacgactggggccagttagga
ctaggatcaaagaacactgtcagcaaaccaacctgtgttaaagctttaaaaccagaaaaa
ccaaaacttgctgtttgtggaagaaaccacactttagtttacacagaaaaaggaaatgtc
tatgctgctggaggtaacagtgaaggccagttgggattaggtgacacagaggaaaggacc
atgttccatttaattagctttttcaccaaccagcacaagatcaagcagctatcagctggg
tcatacacctcagcagcagtaactgaggatgggcagctctttgtatggggtgataattca
gaagggcagattggcctggccggtgaagcctctgtcagtgtcccctgcaaagtggatatt
ggaaaacctgtttcctttgtatcctgtggatattatcattctgccttgattacaggagat
ggtgagctctatacttttggagaagctgtgaatgggaaactgggattattacctgaacag
ctgaagaacaatagagtcccacagcctgtactgggaattatggaaaaggttaataaggtt
gcttgtggtggagaacacactgtggtgctgacagagacagatgtttatacttttggactt
ggacaatatgggcagctgggacatggaacttttgtgtttgaaagttcagtaccaaagcct
gtgaaacgcttgaagaggcataaaatttgtaacattgcatgtggggaaaatcacactgct
gtgatagcagagaatggcctgatgtttacttttggagatggacgacatggcaagttaggc
tttggagaagagagttttacaaatctgtttgatcccactctgtgttacaatttcttgaag
ttcacagtccttttggttgcttgtgggggttgtcacatgctggtttttgctgctccaaga
cctaaaggatctgaaatacccttggaagatttatatgagcctcgtttgactgctgctgcc
tctcagagcagaggggactttgtgctggcaaacactttgcagttatcagcagcacgaatg
agacgtcgagagagggaaaggtcaccagagcagtttgctcgaatggcacaaactctgcct
gccatgggggaaggcttcttaaaatcttcattgcctgtggcaagcaacaccagcccattc
tggttttctgcaagaagtcatcctaaagctgaatctgggagggatggagaccatgagaaa
gaaaatgatcatcaaaaagataaacctagtgaagtctcttcagaacaagattcagataat
gaaaatattgacagaaaccttggggatacaactgacatcttaaatatgacacatgcaatg
aagttgaatcctggtgactggtccttaaaattatcaccactccaaaaacagaagaagaac
aataaaaatgtgaaactgaaaagagatggtaagggtgggctgaaaaacaaggattctgat
ttcacaaaggagggctcaaaattagagtctggctctttacaaaagcagtcttcactttca
gagtcaactggacaagatttagaaaagagtagtgcctttgtagggaagcctgaggccaga
aaaagtataaagaaaggtaaatctgagcatgcacaaagtgatagtactttgaaaagtggt
gctcaagaaattactgaggacaaaagcatattagtgaaaagggaaaaagagtgtgtggaa
aatcctgaatttttcagagaggatgcaagatataatcttcccactgaaaatcaaattctg
actgaaaaaataaattcttccaataaaaagtcaaaagctgttaaatctaagcaatccctt
aaaatagaggtacttccttctgctcccagggatcagccccaggctgattcattaattgta
caggaatacagtcccgttaaaaagcaagggagtcaaaaaacagcagatagtcaaaacaaa
ctaaaggatggtgttgaaaaatctgacaagtgtgaaagaataaatgtcacaggagaagaa
agtagtgcagaacagaaggagcttaaaaaaaagcatcaaattttgaaacaagtatctgta
acttcatcatcatcatcatcatcaactgaggaaagtactaatgatctccaaaaatatata
cttaaggaagaggccttttatgaacacacagttgtgcagggggcaaggaggacagtgaca
catatggacttggaaaaagacagtgagattgaggagatgcaagctacaaacaatgagaaa
gaacatgtagaacagactgatttaaaaagtctgaatgaggaagaaacaagctctgatgct
aaacctgatgaagacaggctattagaaattaagaatgaggaggaatctgatcaggagcag
gagaatgaaagcagtgaaaagggtgaaagtgaaaaagaaaaactggatgaaacaattgac
agtgaaggtaagctaggacaggaagaagagagtgaggttaaaaatgacagagatgaagtt
tcagtagaaaaagatgaagagggaaaagataatgaggaagaaaatgaacaagaagaatca
cagactgaaagagaaagtgggaatgagggtgcagaggagactgaggaggtcagccagcaa
gatggcaaagagcaaagagatgagcaaggcaggttgatggaagaagaagaaatggtgagt
gagggagaaaaggaggatatggaggagaagtatgagaaagaggaaggcactgaaaaagac
aaagagcagggaggggaagatgcagaggaaggggaagaaaaggaggtagaggcagaagaa
gaagaggtatctgaagaagaacaagttgaggaagatgcaaatacagaaactaaggaagtg
ggtgaggatggagtggaagaaggaaaagatggggaggatgaagtggaagaggaaagagga
ggtgagaaagaggaaggaacagaggcagaaggggacaaggggcaagaagatgaaaaggaa
gaagaggagggagaaaatgaagagaaaggggaagataaagaagagggagaaggagtggaa
gaagatgagggagtaggagacgaagaagagagtgttggggaagatgagggaaaagaggga
gtggaagaagaagaggaagatgaggaggaagaagaaggagtggaagaagggggagatgag
gaaacaggagaggaagaagaagaggtagaggagggggaagaggcaggacaggaagaagga
gaaggggaagatgaaggagaaggggaagaggaggaagaggaaaaagaggaagagggtgag
caggaagaggaaaaagaggaagagggtgaggaggaagaggagaaagaggaagagggtgaa
gaggaagaagaagaagaagagggagaagaggaagagggggaagaggatgaaggggaagaa
gaagagggggaagaagaaaaaggggaagagggtgaggaggcagaagaaggggaagaggga
gaggaaggagaaggtgaagaggaagaggggaaaagcaaagccaggaagccagaaaagaca
gaaagtgcttctttaccaaacagctctaaacaaaacgtgaaatccaaacgtcatgtagca
aatggtttacataatccagagcaattttggaacaatgtgctacctcattatttaacacta
aagtag
DBGET
integrated database retrieval system
