Geospiza fortis (medium ground-finch): 102032967
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Entry
102032967 CDS
T03755
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein, fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gfr03041
]
102032967 (RBFOX1)
Spliceosome [BR:
gfr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102032967 (RBFOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
102032967
NCBI-ProteinID:
XP_005427866
UniProt:
A0A8N5EV11
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All DBs
Position
Un
AA seq
417 aa
AA seq
DB search
MLSSQGVLLHPYGVPMILPAAPYFAGLVQGNQEATAPPDTMAQPYASAQFAPPQNGIPAE
YTAPHPHPAPDYTGQSTVPEHTLNMYPPAQTHSEQSAADTNAQTVSGTATQTDDAAQTDG
QQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF
VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYS
PEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLRGRGRTVY
NTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSDSYGRVYAAD
PYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtctcaaggagttttgctacatccctatggagtgccaatgattctgcctgca
gcaccatacttcgctggacttgttcagggtaatcaggaagctacagcacctcctgacaca
atggcacagccttatgcctcagcccagtttgctccacctcagaacggtatccctgcagaa
tacacagccccacatccgcatccagctccagactacacaggccaaagcactgttccagag
cacacgttaaacatgtaccctcctgcccagacacactctgaacagagtgcagctgacaca
aatgcacaaactgtctccggcacagccacacagacagatgatgcagcacagaccgatggc
cagcaacagacacaatcctctgaaaacacagaaaacaaatcacagcccaaacggctccac
gtctcaaatataccattcagattccgggatccagatcttagacaaatgtttggtcaattt
ggtaaaatcttagatgttgaaattatttttaatgagcgaggctcaaagggatttggtttc
gtaactttcgaaaatagtgctgatgcggacagggcgagggagaaattacacggcaccgtg
gtagagggccgtaaaatcgaggtaaataatgccacagcgcgtgtaatgacaaataaaaag
accgtcaacccttacacgaacggctggaaattaaatccagttgttggtgcagtttatagt
ccagagttctatgcaggcagggtgctgctgtgccaggcaaaccaggagggatctcccgtg
tacagtgcccccagttcactagtatacacatccacaatgccaggatttccctaccctgct
gcgaccgcagccgccgcgtacagaggtgcccacctacgaggccggggtcgcacggtgtac
aacacgttccgagcagcagctccccctcctcccatcccagcctacggcggtgttgtatac
caggatggattttatggtgcagacatttatggtggttatgctgcctaccggtatgcccag
cctgccactgccactgcagctgcctacagtgacagttacggacgagtttatgctgcagac
ccctaccaccacacacttgctccagcagccacctacggcgttggtgccgtgaatgctttt
gcacccttgactgatgccaagactaggagccatgctgatgatgtcggtctcgttctttct
tcattacaggctagtatataccgagggggatacagccgttttgctccatactaa
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