KEGG   Geospiza fortis (medium ground-finch): 102034379
Entry
102034379         CDS       T03755                                 
Symbol
SMNDC1
Name
(RefSeq) survival motor neuron domain containing 1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102034379 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gfr03041]
    102034379 (SMNDC1)
Spliceosome [BR:gfr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102034379 (SMNDC1)
 Complex B
    102034379 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    102034379 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 102034379
NCBI-ProteinID: XP_005416437
UniProt: A0A6I9HCD7
LinkDB
Position
Un
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNADNEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSTSALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagaccttgctaagcagttggccagctacaaagctcagctccagcaagtcgag
gctgccttatctggcaatgcagacaatgaggatttactgaaactgaagaaagacttacag
gaagtcatagagttaaccaaagatctcctttcaacacaaccttcggaaacccttgcgagt
tctgacagctccacgtccgccctgcccagtcactcctggaaggttggggacaggtgtatg
gccatatggagtgaggatggacagtgttacgaagctgagattgaagaaatagatgaggag
aatggaacagctgcagttacatttgctggatatggcaatgctgaagtcacacctctgttc
aacctcaagcctgtggaagagggaaggaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagcccagcaacgagagtataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaggaacgagaggaccagaaagtcaagtggcaacag
tttaacaacagagcctattctaaaaacaaaaaaggccaggtgaaaaggagtatttttgct
tcccctgagagcgtaactggcaaggttggcgttggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatataatgtcaggcatctgatgcctcagtaa

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