Geospiza fortis (medium ground-finch): 102036588
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Entry
102036588 CDS
T03755
Symbol
DCP1A
Name
(RefSeq) decapping mRNA 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102036588 (DCP1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gfr03019
]
102036588 (DCP1A)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102036588 (DCP1A)
Messenger RNA biogenesis [BR:
gfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102036588 (DCP1A)
mRNA degradation factors
5'-3' decay
Decapping complex
102036588 (DCP1A)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102036588 (DCP1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_decap_C
DCP1
Motif
Other DBs
NCBI-GeneID:
102036588
NCBI-ProteinID:
XP_014163117
UniProt:
A0A6I9ZA86
LinkDB
All DBs
Position
Un
AA seq
509 aa
AA seq
DB search
MHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAKLMAKVVEQEAQRSQ
QVSQDRKSPSRTNGCNENRPIDILEMLSKAKDEYERNQISDLSIISSSGMQQNSNPPKPE
STEPSEQKPSLQVQDQPFQSRQKHLTLEELFGTSVQKEQPAAPYPNPERMEKLQTDASAR
EQHSLLLPFSFDQSPVMQQSLGKCESPSIKPSASQQDCLTPMIIPPASVSQPELKNVPSY
SVRLSPVLNSASTMEAAPAQMLPGLKQSNSIMQVMQQAAKPISPLVNQPPSDVNHAPQNL
MAGQSQLIAPLTTANTGTVSNASHTSVDLLQKLRLTPQHDQTQQQSLAKSPLTPNISASV
GQLATPESFKESHSKPSALNSKIISPLQTVQQNKESEVFPQPKTLSKASQVAPPQFVTAT
TTVTPSVLLSPSVFQQSATKATEVENKASSSSPLTLGTTEIQTTPPTVLSRSQLQEALIH
LIKNDSRFLSTIHEVYLQVLTKSTDNIKL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacctggttgagccagtaaataaagatttggagtttcagctccatgaacctttt
ctgctctacagaaatgccagcttgtcaatttacagtatttggttttatgacaagaatgac
tgtcatcgaatagcaaaactcatggctaaagtggttgaacaagaagctcagaggtcgcag
caagtttctcaggatagaaaaagtcccagcagaaccaatggctgcaatgaaaacaggccc
attgacatcctagagatgcttagtaaagccaaggatgagtatgaacgaaatcagattagt
gacctaagtattatatcaagttctggaatgcaacagaattcaaatcctccaaagccagaa
agcacagaaccttcagaacagaagccttcattacaggtgcaagaccagccatttcagtca
aggcagaagcatctgactttggaggaactgtttggaacctctgtccaaaaggaacagcct
gcagctccatatcccaatccagagagaatggagaagctgcagacagacgcatctgccaga
gagcagcacagtttgcttttgcctttttcctttgaccagtcaccagtaatgcaacaatcc
ctggggaaatgtgaaagtccaagcattaaacccagtgccagccagcaggactgtttgaca
cctatgataatacctccagcttcagtttcccagcctgagctgaaaaacgttccaagctat
tcagttcgtttaagccctgttcttaattcagcctcgacaatggaagctgcccctgctcag
atgcttcctggcctcaaacaaagcaacagtataatgcaagttatgcagcaagctgccaag
cccatatccccactggtgaatcagccgccatctgacgtgaaccacgctccacagaatctc
atggctggccaaagccagctcatagcacccttgactacagcaaacacagggactgtctca
aatgcatctcatacaagtgttgatcttctccagaaactcaggttgaccccacagcatgac
caaacacagcagcagtctctcgctaagagtcccttaacaccaaacatctctgcctccgtt
ggccaacttgcaacaccagaaagcttcaaagaatctcacagtaagccatcagccttgaac
agcaagataatctctccccttcagactgtacaacaaaacaaggaatcagaagtatttcca
cagccgaaaactttgtctaaagcaagtcaagttgcacctccacagtttgttacagccacg
acgacagtaacaccttcagtcctcttgtctccaagtgtgtttcagcaatcagctacaaaa
gctactgaagtggagaataaagccagttcttcttcgcctttaacacttggaacaacagaa
attcagactacacctcctactgttctcagtaggtctcagcttcaagaagcactgatacat
ctaataaagaatgattcccgttttctcagcactatccatgaagtctacttgcaagtcctc
accaagagtacagacaacattaagctataa
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