Geospiza fortis (medium ground-finch): 102037368 Help Entry 102037368         CDS       T03755                                  Symbol ARID1B Name (RefSeq) AT-rich interaction domain 1B   KO K11653   AT-rich interactive domain-containing protein 1 Organism gfr  Geospiza fortis (medium ground-finch) Pathway gfr03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:gfr00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     102037368 (ARID1B)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:gfr03000]     102037368 (ARID1B)    03021 Transcription machinery [BR:gfr03021]     102037368 (ARID1B)    03036 Chromosome and associated proteins [BR:gfr03036]     102037368 (ARID1B) Transcription factors [BR:gfr03000]  Eukaryotic type   Helix-turn-helix    ARID     102037368 (ARID1B) Transcription machinery [BR:gfr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      102037368 (ARID1B) Chromosome and associated proteins [BR:gfr03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     102037368 (ARID1B) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  BAF250_C ARID ABC_ATPase Motif Other DBs NCBI-GeneID:  102037368 NCBI-ProteinID:  XP_014162126 LinkDB All DBs Position Un AA seq 1790 aa AA seqDB search MDPMVMKRPQLYGMGNNPHSQAQQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMGGMQYPQ QQPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPPMAPGKPNHEDLNLIQQERPSSLPVEVL ASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLS GIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQD RGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGSFQQSNSSGTYGPQMSQYGP QGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPCGSMPLGRMPSAGMQSRPF PGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGNFPAMNQ SGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSAAPMGLADMMTPGESKLPLPLK ADGKEEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSP GWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGTPVASLPAVGKK PLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSLKKQYIQYLFAFECKI ERGEEPPPEVFSSGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPA STPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGINMPDMMGRIPYE PNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSGAMSNMSMSQRQQFSYGSGYD RRLDHGLGREGSMVPPGQGNVVPSNSDPSMYFPNCYPGQQRHEPYGQQYPGQGPPSGQPP YGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYGNAYTGPDRR PMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGGPMQSSSSSEGPQQNMWPTRNDMPYPYQ NRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRP PQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGP PPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWAL DTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHKA AKKDDSQSLAEDTGKDENDECIDYFDEDEEEGEDEKVEGEEKSIVFSTPGAIADPSERPK QASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKME IPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKSITATIDDVLSARPGALPEDSNSGSQTE SSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVP GNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLEV LRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQ RLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLA QGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAA KALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL NT seq 5373 nt NT seq  +upstreamnt  +downstreamnt atggatccgatggtgatgaagaggccgcagctgtacggcatgggcaataaccctcactct caggcacagcagagcagcccctaccccgggcagtcctacggccctcccggcccccagcgc tatcccgtgggaatgcagggccgagccccggcagccatgggaggaatgcagtatccacag caacagccccaggcacagtacctgtcgcaggcccagcagaggtaccaggctcagcaggac atgtctcaggaaggctatggaaccagatctcaaccccctatggccccaggaaagcctaac catgaagacttgaatctaatccagcaagaaagaccatcgagcttaccagttgaagtcttg gcctccgaggatgctacatttggacacaaggatttatctggatccattgacgacttgccg acgggaactgaagcaaccctcagctcagctgttagcgcgtcaggctccacgagcagccaa ggggagcagagcaaccctgcacagtctccgttttcccctcatgcttctccacatctctct ggcatccctgggggcccatcgccttcccctgtaggctcacccgttggaagcaaccagtca agatctggtcccatttctccagcgagtattccaggcagtcagatgccaccgcagcctcct ggcagccagtcagaatccagctcccaccctgccttgagccagtcaccaatgccacaggac cgaggttttatggcaggcatacagaggaacccccaaatgtcacagtatggacctcaacaa actggaccttccatgtcaccacacccctcacctggaggtcaagtgcatcctggaattggt agctttcagcagagtaattcaagtggtacttatgggcctcagatgagccagtatggacca caaggaaactactccagaccaccgacgtacagcggtgtccccaacacaagttacagcggc ccaggacctggcatgggtataaatgccaacagtcagatgcatggacaggggccaagccag ccttgtggttccatgcccctgggacggatgccatcagctgggatgcagagcagaccattt cctggaaacatgagcagtatgacccccaattctcctggcatgtctcaacagggaggccct gggatgggcccacccatgccaactgtgaaccgtaaggcacaggaggcggctgctgcagtg atgcaggctgctgccaactccgctcagagcaggcaaggcaattttcctgccatgaatcag agtgggattatgggctccagctccccctacactcagccaatgaacaacagctctggcctg atgaacccacaggctcctccttacagcatggcacccaacatggtgaacagctcggcagca cctatgggtcttgcagatatgatgacacctggtgagtccaaacttccccttcctctcaaa gcagatggcaaagaagaaggagccccccagcccgagagcaagtcaaaggatagctacagc tctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtcc ccaagctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagccca ggctggccaaagactccatcaagccctaaatcaagttcctctaccacgactggagagaag atcactaaagtctatgagctgggaaatgagccggagcgcaagctgtgggtggatcggtac ctgacgttcatggaggagaggggcacgcctgtggccagtctgccagcggtgggcaagaag cccttggatctcttcaggctctatgtctgcgtcaaggagattggaggtttagcacaggtt aataaaaacaagaagtggcgtgagctggcaaccaccttgaacgttggcacttcgagcagc gcagccagctccctgaaaaaacaatacattcagtacctgtttgccttcgagtgcaagatt gagcgaggggaggagccccctccagaagtcttcagcagtggagataccaagaaacaacct aagattcagccgccatctcctgctaattctggttccttgcaaggcccacagactcctcag tccactggtagtaattccatgacagaagtgccaggcgatttgaagcccccaacaccagca tccacacctcatggacagatgacacctatgcagggtggcagaaacagcgcagtcagtgtg catgatcccttttctgatgtaagtgattcagcgttcccaaagcgaaactccatgacgcca aatgcaccataccagcagggaataaacatgccagatatgatgggaaggataccatatgag ccgaataaagatcctttcggtggaatgagaaaagtgcctggaagcaatgagcctttcatg acccctggacaaatgcctaacagtggaatacaagatatgtataaccagagtccatctgga gcaatgtccaacatgagcatgagccagcgacagcagttctcttatggaagtggctatgac aggaggttggatcatgggctgggtcgtgaaggcagtatggtaccacctggtcaaggcaat gtggtgccttcaaacagtgacccaagcatgtactttcctaattgttaccctggccagcaa aggcatgaaccatatgggcagcagtatccaggacaaggacctccctcaggacagccacca tatggaggacatcaacctggaatgtatccacagcagcagaactacaagagacacatggat ggcatgtatgggcctccagccaaacgccacgaaggggatatgtataacatgcagtatggc aaccagcagcaggaaatgtataaccagtacggcaacgcttacacagggcctgacagaagg ccaatgcagggacagtacccatatccatacaacagggaaaggatgcagggcccaggacaa atgcagcagcatggaatacctccccagatgatcggtggccccatgcagtcgtcatcctcc agtgaaggtcctcagcagaacatgtggccaacacgaaatgatatgccttacccttaccag aacaggcaaggtccaggaggccctgcacaggcccctccgtatccagggatgaatcgcact gatgatatgatggtacctgaccagaggataaaccacgagagtcagtggccttctcatgtc aaccaacggcagccttcttatatgtcatcctcagcctccatgcagcctatcactagacct cctcagtcatcctaccagacaccaccctctatgccaaaccacatctccagagctccaagt ccagcatccttccagcgctctttggaaaaccgtatgtctccaagcaagtctcctttccta ccctccatgaagatgcaaaaggttatacccacagttccagtgtcacaggtcacaggacct ccaccccaaccaccaccaattaggagagagattaccttccccccaggctctgtagaagca tcccaaccagtcttaaaaccaagacgaaagattacctcaaaagatattgtaactcctgag gcctggagagtgatgatgtctcttaaatctggtcttttggctgaaagtacctgggcgctc gacactattaatattcttctgtatgatgacagcactgttgctactttcaacctctctcag ttgtctggatttcttgagcttttagtagaatattttagaaaatgtctgattgacattttt ggaatccttatggaatatgaagtgggagatccaggccacaaagcacttgatcataaagca gccaagaaagatgatagtcagtccttggcagaggatactggaaaagatgagaatgacgaa tgtattgactattttgatgaagatgaggaggagggggaggatgaaaaggtagaaggagaa gaaaagagcattgttttttctactcctggtgccattgctgatccaagtgagaggccaaaa caagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctatttgtt gttgaccgatctgacaaacttggacgcgttcaggaatttgatagtggacttctccactgg cagcttggtggtggtgacacaactgagcatatccagactcactttgaaagcaagatggag attccaccacgcaggaaagcccctcctcccttgaactctccaagcaaaaagaaggacctc gaggggaaaggcgaatctgaggagcagcaagaaaagagtataacagcaaccattgatgat gtcctctcagctcggccaggggcactacctgaagactcaaactctggttcccaaacagag agcagtaaatttcccttcgggatccatcaagccaaaagccaccggaatattaaactgcta gaggatgagccaaggagccgggatgagactcctctatgcaccataactcactggcaagac tccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtgcct ggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatactgggaaagttgatc cttcttcaccacgagcatccagaaagaaagcgagcaccgcagacttacgagaaagaggaa gaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgaggtc ttgagggataatacattggtcacattagccaacatttctgggcagctagacttgtctgct tatacggaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgcccg tctgcagaggcacaggatccttttccaaccgtggggcccaactcagttctttcgcctcag agacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtggaccttatc ttggccacccccccattcagccgtcaggagaaactctacgctactttagttaggtacgtt ggggaccgcaaaaacccggtctgccgagaaatgtccatggcgctcctatcgaaccttgcc cagggggacacattagcagcaagggcaatagctgtgcagaaaggaagcattggaaacttg ataagcttcctggaggatggggtcactatggcccagtaccagcagagccagcataacctc atgcacatgcagcctccgcctctggagccgcctagcgtagacatgatgtgcagggcagcc aaggccttgctggccatggcgagagtggacgagaaccgctccgagttccttttgcacgag ggtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtcatc tgtgatgtactttttcagattgggcagttatga

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