Geospiza fortis (medium ground-finch): 102038477
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Entry
102038477 CDS
T03755
Symbol
CHPF
Name
(RefSeq) chondroitin polymerizing factor
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gfr01100
Metabolic pathways
Module
gfr_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
102038477 (CHPF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gfr01003
]
102038477 (CHPF)
Enzymes [BR:
gfr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
102038477 (CHPF)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
102038477 (CHPF)
Glycosyltransferases [BR:
gfr01003
]
Glycan extension
O-Glycan
102038477 (CHPF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
102038477
NCBI-ProteinID:
XP_005415864
UniProt:
A0A6I9HC03
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All DBs
Position
Un
AA seq
660 aa
AA seq
DB search
MRQRLFVGVLTSKSTLNTLGVAVNRTLAHRLERLVYFTGTRGRKVPHGMTVVTHSDERPI
WNMYQTIRYLLDHYVNDFDWFFLVQDDTYTEAHRISRLVAHLSIDTHLYLGRPEEFIGGD
TEGRYCYGGFGYLLSHSLLLLLQQHLESCRNDILSARPDEWLGRCIIDYTGVNCVEEHEG
LHYHYFELGKNADPERETDLRFQSAFTVHPVLDPLQMYRLHKYFAQVELERTYQEIQQLQ
MEIQNASSLSADGDHIATWPIGIPPPFQPKTRFEVLRWDYFTEEQVYACVDGSPKCELHG
ADLADVADVVATAMEELTRKSQPVLHVRKQQLVNGYRRFDPTRGMEYTLDLQVEVVTQKG
HSRSVTKRVHLVRPLSEVEIIPMPYVTEASRINVILPLTAHDRDYAARFLEAYAAAAFES
SENAVLTFLFIYDPFEAQQVTQNDIFASVKSQITEYERKYAEVKIPWISVKTDAPSQIKV
MDIISKKHPVDTLFFVAGVGTEVTIDFLNRCRMNTINNWQVFFPIHFQGYNPAIAYHNQV
PPTTLDLLRDMGHFDRDVFHEACFYNADYMAARTRMAGDVQENEDILETLDIYDMFIKYS
NLHVFRAVEPALLQRYRHQACNPRLSEDIYHRCVQSSLEGVGSRSQLAMVLFEQEQGNST
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagcggctctttgtgggcgtgctgacctccaagagcacactgaacacgctgggg
gtggctgtcaaccgcacgctggcccaccgcctggagcgcctggtgtacttcaccgggaca
cggggccgcaaggtgccccatggcatgacggtggtgacgcacagcgacgagcggcccatc
tggaacatgtaccagaccatcaggtaccttctggaccactacgtgaacgatttcgactgg
ttcttcctggtgcaggatgatacctacacggaggcgcaccgcatcagccgcctggttgcc
cacctcagcattgacacccacctctacctgggtcgtcctgaggagttcatcggtggggac
actgagggacgttattgctatggagggtttggctacttgctgtcccacagcctcctcctg
ctcctgcagcagcacctggagagctgccgcaatgacatcctcagtgcccggcctgatgag
tggctgggccgctgcatcattgactacacaggtgtcaactgtgttgaggaacacgagggt
ctgcattaccactatttcgagctggggaagaacgcagaccctgaacgggagaccgacctc
cgcttccagagcgccttcactgtccaccctgtgctggatcccctccagatgtaccggctg
cacaagtactttgcacaggtggagctcgagagaacctatcaggagatccagcagctccag
atggagatccagaatgccagcagcctgtctgcggatggggaccacatcgccacatggccc
attggcatcccacccccattccagcccaaaactcgctttgaggtgctgcgctgggactac
ttcacagaggagcaggtctatgcctgtgtggatggctcccccaagtgtgagctgcatggt
gcagatctggcggacgtggccgatgtggtggccacggccatggaggagctgacccgcaag
tcccagccagtgctccatgtccgcaagcagcagctggtgaacggctaccggcgcttcgac
cccacacgtggcatggagtacacgctggaccttcaggtggaggtggtcacccagaaggga
cacagccggtctgtcactaagcgagtgcacctggtgcggcccctcagcgaggtggagatc
atccccatgccctatgtgacagaggccagtcgcatcaatgtcatcctgccgctgacggcc
catgaccgggactacgccgcccgctttctggaggcttatgcagcagccgcttttgagagc
agtgagaatgcagtgctcaccttcctcttcatctatgacccctttgaggcccagcaggtc
acccagaatgatatctttgcctctgtgaagtcccagatcaccgagtatgagcgcaagtat
gcagaggtaaagatcccctggatcagtgttaagacagacgcgccctcccaaatcaaggtc
atggacattatctccaagaagcatcctgtggacacacttttctttgtggctggcgtgggg
acagaggtcaccattgacttccttaaccgctgccggatgaacaccataaacaactggcag
gttttcttccccatccacttccagggctacaacccagctattgcttaccacaaccaggtg
ccacccaccacactggacctgctgagggacatggggcactttgaccgtgacgtcttccat
gaagcctgcttctacaacgctgactacatggcagcacgcacccgcatggcgggggacgtg
caggagaatgaggacatcctggagaccctggacatctacgacatgttcatcaagtactcc
aacctccacgtcttccgggctgtggagcctgccctgctgcagcgctaccggcaccaggcc
tgcaacccccggctcagcgaggacatctaccaccgctgtgtgcaaagcagcctggagggc
gtaggctctcgctcccagctggccatggtcctttttgagcaggagcaggggaacagcacc
tga
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