Geospiza fortis (medium ground-finch): 102039711
Help
Entry
102039711 CDS
T03755
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03022
Basal transcription factors
gfr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102039711 (GTF2H2)
09124 Replication and repair
03420 Nucleotide excision repair
102039711 (GTF2H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gfr03021
]
102039711 (GTF2H2)
03400 DNA repair and recombination proteins [BR:
gfr03400
]
102039711 (GTF2H2)
Transcription machinery [BR:
gfr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102039711 (GTF2H2)
DNA repair and recombination proteins [BR:
gfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102039711 (GTF2H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
VWA_3
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
102039711
NCBI-ProteinID:
XP_005425050
LinkDB
All DBs
Position
Un
AA seq
417 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHVTALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVLSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSTSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNNDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYKGERYCQGCQGEMKDQNVYIC
KVCQNAFCVECDLFVHDSLHCCPGCIHEHPAPVSEDKVAERQRTCKRAIPGLIQTIV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacccgagcggaccaagcgctgggaaggaggctacgaaagaacatgggaa
attcttaaggaagacgaatccgggtcgttgaaggcaaccatcgaggacattctcttcaag
gcaaagaggaaaagactctatgaacaccatggacaagttcggcttggaatgatgcgtcac
ctttacgtggttgttgatggatcaagaacgatggaggaccaagacttaaagccaaacaga
cttacttgcactctgaagttattggaatattttgttgaagagtactttgaccagaatcct
attagtcagattggcttaattgtaaccaagagtaaaagagctgaaaaaatgacagaactc
tcaggaaactcgaaaaagcatgtaactgctctgaagaaagcagtggatatgaactgcagt
ggagagccttctctatataattccctaaatttggccatgcagactttaaagcacatgcca
ggacatacaagcagagaggttttggtagtcctcagcagtctgacgacatgtgatccagcc
aacatctatgatctaattaagtgtttaaaagcagtaaagatcagagtatctgtcatcggc
ttaagtgctgaagttcgagtttgtacagtacttgcccgagaaactggtggaacgtaccac
gttattttggatgaaagtcattataaggaactgctgatgcaccatgtcagtcctccacct
gccagttcaacttctgagtgctcccttattcgaatgggttttcctcagcatactattgct
tctctgtctgatcaagatgcaaagccctcctttagcatggcgcaattggaaaataacaat
gacccaggtcttacactgggtggatatttttgtcctcagtgcagagccaaatactgtgag
cttcctgtggaatgcaaaatctgtggtcttacgttagtgtctgcacctcacctggctcgg
tcttaccatcacttgtttcctttagatgcctttcaggaagttccactggaagaatacaaa
ggggaacggtattgtcaaggctgccagggagaaatgaaagatcaaaatgtgtacatatgc
aaagtgtgtcagaatgcattttgtgtggagtgcgatctgtttgttcatgattcgctgcac
tgctgtcctggctgtattcacgagcaccctgctcctgtatctgaggataaggttgctgaa
aggcagagaacttgcaaaagggcaatacctgggttaatacaaactattgtgtga
DBGET
integrated database retrieval system
