Geospiza fortis (medium ground-finch): 102041520
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Entry
102041520 CDS
T03755
Symbol
CYLD
Name
(RefSeq) CYLD lysine 63 deubiquitinase
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04217
Necroptosis
gfr04622
RIG-I-like receptor signaling pathway
gfr04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
102041520 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102041520 (CYLD)
04625 C-type lectin receptor signaling pathway
102041520 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102041520 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102041520 (CYLD)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102041520 (CYLD)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C67
102041520 (CYLD)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102041520 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
102041520
NCBI-ProteinID:
XP_005426501
UniProt:
A0A6I9HNC0
LinkDB
All DBs
Position
Un
AA seq
953 aa
AA seq
DB search
MNSGLWSQEKASSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVAHSR
NIPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
AKGVQIDIGSPVRVQLRSGDEKYPGVVRFRGPLMQERSLTGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPETVSQDRRPPKLAYTSRSGDKGLFNHSKPKAIGSTSEPGNRSRSEVFYTLNGSSV
DSQPQTKTKSPWYMDEAAEDPSKSLTDSSSGFGHSSPPLQPPLTNSVSTENRFHSLPFSL
TKTTSTNGTMGHSPLSLSVQSVMGDVNTTATQDSPSAASPIGNSHGLEAGSLAEVKENPP
FYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPDS
RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCYL
DSTLFCLFSFSSVLDTVLLRPKEINDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR
KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKNE
KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLED
TPRQCRICRGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPKD
LPDWDWRHGCIPWQEMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFNI
PQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaggcttatggagtcaagaaaaagcaagttcatcctactgggaagagaggatc
ttttacttgcttctccaagaatgcagtgtcatagacaagcagactcaaaagctcttgaaa
gtgcccaaaggtagcattgggcagttttttcaagaccgttcttctgtggcacactccaga
aatattccatgtaaaggcaagaaactgcagattggattaaagattctggaacagcctcat
gcaatcttgttcgtggatgagaaggatgttatagaaataaatgaaaaactagctgagttg
cttctggctattactaactgtgaggaaagatacagtttgtttaagagcaaaagcaggtta
gctaaaggagtgcagatagatattggctctcctgttagagtacagctgagatcaggggat
gagaaatatcctggagttgttcgcttcaggggacccttaatgcaagaaaggtccctaaca
gggatatactttggagtagagttgctggaagaaggtcgtggtcagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgtgatgaggactgtggggtttttgttgctttg
gacaaactggagctggtggaagatgatgacaatgaactggaaagtgactatgcagctcca
gttgacgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatggcacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggagtggacatggataatccgattggaaactgggatggaaga
tataatggaatacagctgtgcagttttgcaagtgttgaaagtacacttcttttgcatatc
aatgatgttattccagagactgtgtcacaggacaggagacctcccaagcttgcctatacc
tcaagaagtggtgacaaaggcttgttcaatcatagtaagccaaaggctataggatctacc
tctgaacctggaaatagaagcagatctgaagtcttctacacattaaatggctcatcagtt
gactctcagcctcaaacaaaaacaaaatccccatggtatatggatgaagctgctgaagac
ccttcaaagtcacttactgattcttcttctggatttgggcattcttcaccaccactgcag
ccacctttaacaaactctgtgtctacagaaaacagatttcactccctcccctttagcttg
acaaaaacaacaagtactaatggtactatgggacatagtcctctctctttatctgttcag
tctgtcatgggtgatgtgaatactacagctacccaggacagtccatcagcagcaagtcca
attggaaactcacatggtcttgaagcaggttccttggctgaagttaaagaaaatcctcct
ttctatggagtaatccgctggattggccagccccctggagtaaatgaagtgttagcagga
ctggaactggaagatgaatgtgcaggctgcacggatgggacatttaaaggaactcgctac
ttcacgtgtgctccaaagaaagctctttttgtaaaactcaaaagctgcaggccagactcc
aggtttgcctcactgcagcctgtttccaaccagatcgagcgctgcaactctctagccttt
ggaggttacttaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaaggt
ttagagacaatgattggaaagaagaaaggtatccagggtcattacaactcctgttactta
gactccaccttattctgcctgttttcttttagctctgttttggacactgtgctactcaga
cctaaagaaattaatgatgtagagtattatagtgagactcaggagctgctgaggacagag
attgtgaatcctctgagaatatatggatatgtatgtgctacaaaaataatgaaactgagg
aaaatacttgaaaaagttgaggctgcatcaggattcacttcagaggaaaaagatccggaa
gaatttttgaatattttatttcaccatattctgagagttgagccactgttgaaaataaga
tcagcaggtcagaaagtacaagactgttacttctatcaaatttttatggacaaaaatgag
aaagttggagtcccaacaattcagcagttactggagtggtcattcatcaacagcaacttg
aagtttgcagaggcaccctcttgcctgattatccagatgccccggtttggaaaagacttc
aaaatgttcaataaaatttttccatccttggaattaaatataacagacttacttgaagac
actcccaggcagtgccgtatctgcagagggctcgctatgtacgagtgcagggagtgttat
gaagacactgatatttctgctggcaaaatcaagcagttctgcaaaacatgcaatacacag
gttcatcttcatcccaagagacagagtcataaattcaatccgctgtcgcttccgaaggac
ctgccggactgggactggcggcacggctgcatcccctggcaggagatggagctgtttgcg
gtgctgtgcatcgagaccagccactacgtggccttcgtcaagtacggccgggacgactcc
gcctggctcttcttcgacagcatggcagatcgggatggaggtcagaatggctttaacatt
ccacaagttaccccgtgtccagaagttggtgaatacctgaagatgtctctagaagaattg
cactcactggattccaggaaaatccaaggctgtgcacgaagactgctttgtgatgcttac
atgtgcatgtatcaaagtccaacaatgagtttatacaaatga
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