KEGG   Geospiza fortis (medium ground-finch): 102042003
Entry
102042003         CDS       T03755                                 
Symbol
RAPGEF2
Name
(RefSeq) Rap guanine nucleotide exchange factor 2
  KO
K08018  Rap guanine nucleotide exchange factor 2
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04010  MAPK signaling pathway
gfr04530  Tight junction
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102042003 (RAPGEF2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    102042003 (RAPGEF2)
SSDB
Motif
Pfam: RasGEF RasGEF_N RA cNMP_binding PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 102042003
NCBI-ProteinID: XP_005415627
LinkDB
Position
Un
AA seq 1622 aa
MDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEANEVLYYPDDIGTCWYILLSGSV
FIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVVDYMEENEEYFQRQASHRQSRRR
FRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTLPADFTKLHLTDSLHPQVTHVSSSHSG
CSITSDSGSSSLSDIYQATESEAGDMDLSGLPETAVDSEDDDDEEDIERASDPLMSRDIV
RDCLEKDPIDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDG
EELDSWSVILNGSVEVTYPDGRTEILCMGNSFGVSPTMEKEYMKGVMRTKVDDCQFVCIA
QQDYCRILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTAERLTMHLVEEH
SVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEWFNDPSLRDKVTRVVLLWVNNHFNDFEGD
PAMTRFLEEFENNLEREKMGGHLRLLNIACAAKAKRRLITLTKPSREAPLPFILLGGSEK
GFGIFVDSVDFGSKATEAGLKRGDQILEVNGQNFENIQLTKAMEILRNNTHLSITVKTNL
FVFKELLTRLSEEKRNGAPHLPKIGDIKKASRYSIPDLAVDVEQVIGLEKVNKKSKANTV
GGRNKLKKILDKTRISILPQKPYNDIGIGQSQDDSIVGLRQTKHIPPALPVSGTLSSSNP
DLLQSHHRILDFNTTPDLPDQVLRVFKADQQSRYIMISKDTTAKEVVIQAIREFALTATP
DAYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQLSGRYYLKNNMETETLCSDEDAQELLR
ESQISLLQLSTVEVATQLSMRNFELFRNIEPTEYIDDLFKLKSKTGCTNLKRFEEVINQE
TFWVASEILRETNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVARLRTTWE
KLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSK
VEGLVNFEKLRMIAKEIRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVA
QAGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLDLEMDEESLQTLSLQCEPATNTL
PKNTGDKRSGKSETSPVAPRAGIQQKVQQQHKVNQALQVPAVSLYPSRKKVPVKDLPPFG
INSPQALKKILSLSEEGSLDPHKKQSEDAVSSASSQLSSPPTSPQSSPRKGYTLAPSSTV
DNFSDSGHSEISSRSSIVSNSSFDSMPVPLHDERRQRHSVSIVETNLGVGRIDRRIMIEP
DQYSLGSYAPLSETRGLYAGATVLSSPSTEELSQDQGDRASLDAADSGRGSWTSCSSGSH
DNIQTIQHQRSWETLSFGHAHFDSSGDGAGLWASGSHMDQLMFPDHGTKYGRQSQGREGL
DQAQSRASWASSTGYWGEDSEGDTGTIKRRGGKDVSIEAETSSITSVPAEETKPAPVPAH
TAAASSSTKGLVARKEGRYREPPPTPPGYVGIPIAEFAEGGSHPTRKPPDYNVALQRSRM
VARTCETHGTATPQQQSHGHSTGRPVNKPQWHKPNESDPRLAHYPSQGFSTEEDEDEQVS
AV
NT seq 4869 nt   +upstreamnt  +downstreamnt
atggacttggagattgtgtattcatacttacatggaatggaagcattgtctaacctgaga
gagcatcagctaagactgatgtgtgaaactgttagatatgaaagacatgaagcaaatgaa
gttctatactaccctgatgatattggtacctgttggtatatccttctgtctggttcagtc
ttcattaaagaatccatgtttcttccaaggagcagttttggcaagcgttctgctggcagc
ttcagacgtggatgtgaatgcattgttttagagccttctgaaatgattgtggttgattac
atggaagaaaatgaggaatatttccagcgtcaagcatctcacaggcaatctcgaaggagg
tttaggaaaatcaaccagaaaggggagcgacaaacaattattgatactgttgacccttat
cctgtggggaagccacctctacccagaggctaccatacgcttcctgcagatttcacaaag
ctgcaccttactgacagtctccacccacaggtgacccacgtttcatctagtcactcggga
tgtagcatcactagtgattcaggaagcagcagcctttctgatatctaccaggctacagaa
agtgaggctggtgatatggatctcagtggattgccagagacagcagtggattctgaggat
gatgatgatgaagaagacattgaaagggcatcagatcctttgatgagtagggatattgtt
agagactgcttggagaaagacccaatagacaggacagatgatgacattgaacaactactg
gaattcatgcatcaattgcctgcttttgccaacatgacaatgtcagtgaggagagaactc
tgtgctgtgatggtgtttgcagttgtggagagagcaggaactattgtactaaatgatggg
gaagagctggattcctggtcagtcattttgaatggctctgtggaggtgacataccctgat
ggaagaacagagatattgtgcatggggaatagttttggtgtttcccccaccatggaaaag
gaatatatgaaaggagtgatgagaacaaaagtggatgactgccagttcgtttgcatagcc
cagcaagattattgccgcatcctcaatcaagtggaaaagaacatgcagaaggtggaagag
gaaggggagattgtgatggtgaaggagcacagggagttggaccgcactggaacgaggaaa
ggccacattgtcatcaagggaacagctgaaaggttaacaatgcatttggtggaagagcac
tctgtggtagacccaacatttatagaagacttcctattgacgtataggacctttctttcc
agcccaatggaagtgggcaagaagttgttggagtggttcaatgaccccagcctcagggat
aaggttacacgggtagtattgttgtgggtgaacaatcacttcaatgattttgaaggagat
cctgctatgactcgatttctggaggaatttgagaacaatttggagagggagaaaatgggt
ggacatttgaggctgttaaatattgcttgtgctgctaaagctaaacgaagattgataacc
ttaacaaagccatctcgagaagcccctttgccttttatcttgctgggagggtcagaaaag
ggatttggaatctttgttgacagtgtagattttggtagcaaagctacagaagcaggcttg
aaacgtggagaccagatattggaagtgaatggtcaaaactttgaaaacattcagttgaca
aaagccatggaaatccttagaaataacactcatctgtctatcactgtgaaaaccaattta
tttgtttttaaagaactcttaacaaggttgtcagaggaaaaaagaaatggtgctccccac
ctgcctaaaattggtgatattaaaaaggcgagtcgttattccatccctgaccttgctgtt
gatgtggagcaggtaataggattagaaaaagtaaataagaaaagtaaagccaacacagtt
ggaggaagaaataagttaaagaagatacttgacaagactcgaatcagcattctgcctcag
aaaccatacaatgacattggaattggccagtctcaggatgacagcattgtaggactgagg
caaacaaagcacattcctcctgctttacctgtcagtggaaccctgtcatccagtaatccc
gacctgctgcagtctcatcaccgcatcttagactttaacactactccagacttaccagac
caagttctgcgggttttcaaggcagaccagcaaagtcgctacataatgatcagcaaggac
accacagcaaaggaagtggtcatccaggccatcagggagtttgctctgactgcaacccct
gatgcctattcactgtgtgaggtctctgtcacacctgagggtgtcatcaagcaaaggagg
ctccctgatcagctctccaagcttgctgacaggatacagctgagtggcaggtattacctg
aagaacaacatggaaacagaaactctttgttcagatgaagatgctcaagagttgctaagg
gaaagccaaatttccctactacagctcagtactgttgaggtggctacccaactatccatg
aggaactttgagctgttccgtaatatcgaacccacggaatacatagatgacttgtttaaa
ctcaaatcaaaaacaggttgcactaatctaaaaaggtttgaagaggtgataaatcaagaa
acattctgggtggcttctgagattctaagagaaaccaaccagctgaaaaggatgaagatc
attaagcatttcattaagatagcgctacactgcagagaatgcaagaacttcaactcgatg
tttgccatcattagtggcctgaatttggcaccagttgcgaggctccgaactacttgggaa
aaacttccaagcaagtatgaaaaactgtttcaagatctacaggacttgtttgatccatct
aggaatatggcaaaatatcgtaacgtccttaacagccaaaacttacagccccctattatc
cccctgtttcctgtcatcaaaaaagaccttacattccttcatgaaggaaatgattctaaa
gtggagggcctggtgaattttgagaagctgcggatgattgcgaaggagatacgccatgtg
ggtcgcatggcatccgtgaacatggaccctgctcttatgtttagaacaaggaagaagaaa
tggaggagtttggggtctctcagccagggcagtgccaatgcagctgtgctggatgttgca
caagcaggggggcataaaaagcgggtccgtcgcagttcctttcttaatgctaaaaagctt
tatgaagatgctcagatggcacggaaagtgaagcagtatctctcaaacttggatctggaa
atggatgaagagagccttcagacactctctctgcagtgtgagccagccacaaacacattg
ccgaagaatacgggagacaagcgatctgggaaatctgaaacgtcaccagtggctccccgg
gcaggcatccagcagaaagtgcagcagcagcacaaagtaaaccaagcactgcaggtccca
gccgtgtctctttacccctctcgcaagaaggtgccagtcaaagacctgccaccattcggc
attaactccccacaagctttaaagaaaatcctttcattatcagaagaaggaagtttggat
cctcacaagaaacaatctgaagacgctgtctcaagtgcatcttcgcagctctcttctcct
cctacttcaccacagagctctccaaggaaaggctacactttggctccaagcagcaccgtg
gataacttctccgattctggtcacagtgaaatttcttccagatctagtattgtcagcaat
tcctctttcgactctatgccagtccccctgcatgatgagaggagacagaggcattctgtc
agcatcgtggagacaaatcttggtgtgggaaggattgatagaagaatcatgattgaacca
gatcaatacagcttaggctcatatgcaccgctgtcagagaccagaggcctgtatgctgga
gcaactgtactttcttctcctagtacagaagagctgtcacaggaccagggggacagagct
tcgctcgacgcagctgacagcggccgtgggagctggacttcttgctcgagtggctcccat
gacaacatccagactatccagcaccagaggagctgggagacactgtctttcggacacgct
cattttgatagttcaggcgatggggcaggactgtgggcctcaggcagccacatggaccag
ctgatgttccctgaccatggcacaaagtatggcaggcaaagtcaaggtagggagggcctt
gatcaagcacagtccagagcaagctgggcatcttccacaggatactggggagaggactcc
gagggtgatacaggtaccataaagcggaggggtgggaaggatgtttcaattgaagctgaa
accagtagcataacatctgtaccagcagaggagacaaagccagctcctgtccctgcccac
acagcagcagcatcaagtagtaccaaggggcttgttgcaagaaaagagggtcgataccgg
gaaccacctccaactcctcccggttatgtaggaatacctattgctgagtttgcagaaggt
ggctcccatcccaccaggaagcctccagactacaatgtggcacttcagaggtctagaatg
gtggcacggacatgtgagactcatgggacagcaactccacagcagcagtcgcacggccac
tcaactggcaggcccgtgaacaaacctcagtggcataaaccaaatgagtcagacccacgt
cttgctcactatccatctcaagggttttccacagaggaagatgaagatgaacaagtctct
gctgtctaa

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