Geospiza fortis (medium ground-finch): 102042003
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Entry
102042003 CDS
T03755
Symbol
RAPGEF2
Name
(RefSeq) Rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04010
MAPK signaling pathway
gfr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102042003 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102042003 (RAPGEF2)
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Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
cNMP_binding
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102042003
NCBI-ProteinID:
XP_005415627
LinkDB
All DBs
Position
Un
AA seq
1622 aa
AA seq
DB search
MDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEANEVLYYPDDIGTCWYILLSGSV
FIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVVDYMEENEEYFQRQASHRQSRRR
FRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTLPADFTKLHLTDSLHPQVTHVSSSHSG
CSITSDSGSSSLSDIYQATESEAGDMDLSGLPETAVDSEDDDDEEDIERASDPLMSRDIV
RDCLEKDPIDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDG
EELDSWSVILNGSVEVTYPDGRTEILCMGNSFGVSPTMEKEYMKGVMRTKVDDCQFVCIA
QQDYCRILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTAERLTMHLVEEH
SVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEWFNDPSLRDKVTRVVLLWVNNHFNDFEGD
PAMTRFLEEFENNLEREKMGGHLRLLNIACAAKAKRRLITLTKPSREAPLPFILLGGSEK
GFGIFVDSVDFGSKATEAGLKRGDQILEVNGQNFENIQLTKAMEILRNNTHLSITVKTNL
FVFKELLTRLSEEKRNGAPHLPKIGDIKKASRYSIPDLAVDVEQVIGLEKVNKKSKANTV
GGRNKLKKILDKTRISILPQKPYNDIGIGQSQDDSIVGLRQTKHIPPALPVSGTLSSSNP
DLLQSHHRILDFNTTPDLPDQVLRVFKADQQSRYIMISKDTTAKEVVIQAIREFALTATP
DAYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQLSGRYYLKNNMETETLCSDEDAQELLR
ESQISLLQLSTVEVATQLSMRNFELFRNIEPTEYIDDLFKLKSKTGCTNLKRFEEVINQE
TFWVASEILRETNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVARLRTTWE
KLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSK
VEGLVNFEKLRMIAKEIRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVA
QAGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLDLEMDEESLQTLSLQCEPATNTL
PKNTGDKRSGKSETSPVAPRAGIQQKVQQQHKVNQALQVPAVSLYPSRKKVPVKDLPPFG
INSPQALKKILSLSEEGSLDPHKKQSEDAVSSASSQLSSPPTSPQSSPRKGYTLAPSSTV
DNFSDSGHSEISSRSSIVSNSSFDSMPVPLHDERRQRHSVSIVETNLGVGRIDRRIMIEP
DQYSLGSYAPLSETRGLYAGATVLSSPSTEELSQDQGDRASLDAADSGRGSWTSCSSGSH
DNIQTIQHQRSWETLSFGHAHFDSSGDGAGLWASGSHMDQLMFPDHGTKYGRQSQGREGL
DQAQSRASWASSTGYWGEDSEGDTGTIKRRGGKDVSIEAETSSITSVPAEETKPAPVPAH
TAAASSSTKGLVARKEGRYREPPPTPPGYVGIPIAEFAEGGSHPTRKPPDYNVALQRSRM
VARTCETHGTATPQQQSHGHSTGRPVNKPQWHKPNESDPRLAHYPSQGFSTEEDEDEQVS
AV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggacttggagattgtgtattcatacttacatggaatggaagcattgtctaacctgaga
gagcatcagctaagactgatgtgtgaaactgttagatatgaaagacatgaagcaaatgaa
gttctatactaccctgatgatattggtacctgttggtatatccttctgtctggttcagtc
ttcattaaagaatccatgtttcttccaaggagcagttttggcaagcgttctgctggcagc
ttcagacgtggatgtgaatgcattgttttagagccttctgaaatgattgtggttgattac
atggaagaaaatgaggaatatttccagcgtcaagcatctcacaggcaatctcgaaggagg
tttaggaaaatcaaccagaaaggggagcgacaaacaattattgatactgttgacccttat
cctgtggggaagccacctctacccagaggctaccatacgcttcctgcagatttcacaaag
ctgcaccttactgacagtctccacccacaggtgacccacgtttcatctagtcactcggga
tgtagcatcactagtgattcaggaagcagcagcctttctgatatctaccaggctacagaa
agtgaggctggtgatatggatctcagtggattgccagagacagcagtggattctgaggat
gatgatgatgaagaagacattgaaagggcatcagatcctttgatgagtagggatattgtt
agagactgcttggagaaagacccaatagacaggacagatgatgacattgaacaactactg
gaattcatgcatcaattgcctgcttttgccaacatgacaatgtcagtgaggagagaactc
tgtgctgtgatggtgtttgcagttgtggagagagcaggaactattgtactaaatgatggg
gaagagctggattcctggtcagtcattttgaatggctctgtggaggtgacataccctgat
ggaagaacagagatattgtgcatggggaatagttttggtgtttcccccaccatggaaaag
gaatatatgaaaggagtgatgagaacaaaagtggatgactgccagttcgtttgcatagcc
cagcaagattattgccgcatcctcaatcaagtggaaaagaacatgcagaaggtggaagag
gaaggggagattgtgatggtgaaggagcacagggagttggaccgcactggaacgaggaaa
ggccacattgtcatcaagggaacagctgaaaggttaacaatgcatttggtggaagagcac
tctgtggtagacccaacatttatagaagacttcctattgacgtataggacctttctttcc
agcccaatggaagtgggcaagaagttgttggagtggttcaatgaccccagcctcagggat
aaggttacacgggtagtattgttgtgggtgaacaatcacttcaatgattttgaaggagat
cctgctatgactcgatttctggaggaatttgagaacaatttggagagggagaaaatgggt
ggacatttgaggctgttaaatattgcttgtgctgctaaagctaaacgaagattgataacc
ttaacaaagccatctcgagaagcccctttgccttttatcttgctgggagggtcagaaaag
ggatttggaatctttgttgacagtgtagattttggtagcaaagctacagaagcaggcttg
aaacgtggagaccagatattggaagtgaatggtcaaaactttgaaaacattcagttgaca
aaagccatggaaatccttagaaataacactcatctgtctatcactgtgaaaaccaattta
tttgtttttaaagaactcttaacaaggttgtcagaggaaaaaagaaatggtgctccccac
ctgcctaaaattggtgatattaaaaaggcgagtcgttattccatccctgaccttgctgtt
gatgtggagcaggtaataggattagaaaaagtaaataagaaaagtaaagccaacacagtt
ggaggaagaaataagttaaagaagatacttgacaagactcgaatcagcattctgcctcag
aaaccatacaatgacattggaattggccagtctcaggatgacagcattgtaggactgagg
caaacaaagcacattcctcctgctttacctgtcagtggaaccctgtcatccagtaatccc
gacctgctgcagtctcatcaccgcatcttagactttaacactactccagacttaccagac
caagttctgcgggttttcaaggcagaccagcaaagtcgctacataatgatcagcaaggac
accacagcaaaggaagtggtcatccaggccatcagggagtttgctctgactgcaacccct
gatgcctattcactgtgtgaggtctctgtcacacctgagggtgtcatcaagcaaaggagg
ctccctgatcagctctccaagcttgctgacaggatacagctgagtggcaggtattacctg
aagaacaacatggaaacagaaactctttgttcagatgaagatgctcaagagttgctaagg
gaaagccaaatttccctactacagctcagtactgttgaggtggctacccaactatccatg
aggaactttgagctgttccgtaatatcgaacccacggaatacatagatgacttgtttaaa
ctcaaatcaaaaacaggttgcactaatctaaaaaggtttgaagaggtgataaatcaagaa
acattctgggtggcttctgagattctaagagaaaccaaccagctgaaaaggatgaagatc
attaagcatttcattaagatagcgctacactgcagagaatgcaagaacttcaactcgatg
tttgccatcattagtggcctgaatttggcaccagttgcgaggctccgaactacttgggaa
aaacttccaagcaagtatgaaaaactgtttcaagatctacaggacttgtttgatccatct
aggaatatggcaaaatatcgtaacgtccttaacagccaaaacttacagccccctattatc
cccctgtttcctgtcatcaaaaaagaccttacattccttcatgaaggaaatgattctaaa
gtggagggcctggtgaattttgagaagctgcggatgattgcgaaggagatacgccatgtg
ggtcgcatggcatccgtgaacatggaccctgctcttatgtttagaacaaggaagaagaaa
tggaggagtttggggtctctcagccagggcagtgccaatgcagctgtgctggatgttgca
caagcaggggggcataaaaagcgggtccgtcgcagttcctttcttaatgctaaaaagctt
tatgaagatgctcagatggcacggaaagtgaagcagtatctctcaaacttggatctggaa
atggatgaagagagccttcagacactctctctgcagtgtgagccagccacaaacacattg
ccgaagaatacgggagacaagcgatctgggaaatctgaaacgtcaccagtggctccccgg
gcaggcatccagcagaaagtgcagcagcagcacaaagtaaaccaagcactgcaggtccca
gccgtgtctctttacccctctcgcaagaaggtgccagtcaaagacctgccaccattcggc
attaactccccacaagctttaaagaaaatcctttcattatcagaagaaggaagtttggat
cctcacaagaaacaatctgaagacgctgtctcaagtgcatcttcgcagctctcttctcct
cctacttcaccacagagctctccaaggaaaggctacactttggctccaagcagcaccgtg
gataacttctccgattctggtcacagtgaaatttcttccagatctagtattgtcagcaat
tcctctttcgactctatgccagtccccctgcatgatgagaggagacagaggcattctgtc
agcatcgtggagacaaatcttggtgtgggaaggattgatagaagaatcatgattgaacca
gatcaatacagcttaggctcatatgcaccgctgtcagagaccagaggcctgtatgctgga
gcaactgtactttcttctcctagtacagaagagctgtcacaggaccagggggacagagct
tcgctcgacgcagctgacagcggccgtgggagctggacttcttgctcgagtggctcccat
gacaacatccagactatccagcaccagaggagctgggagacactgtctttcggacacgct
cattttgatagttcaggcgatggggcaggactgtgggcctcaggcagccacatggaccag
ctgatgttccctgaccatggcacaaagtatggcaggcaaagtcaaggtagggagggcctt
gatcaagcacagtccagagcaagctgggcatcttccacaggatactggggagaggactcc
gagggtgatacaggtaccataaagcggaggggtgggaaggatgtttcaattgaagctgaa
accagtagcataacatctgtaccagcagaggagacaaagccagctcctgtccctgcccac
acagcagcagcatcaagtagtaccaaggggcttgttgcaagaaaagagggtcgataccgg
gaaccacctccaactcctcccggttatgtaggaatacctattgctgagtttgcagaaggt
ggctcccatcccaccaggaagcctccagactacaatgtggcacttcagaggtctagaatg
gtggcacggacatgtgagactcatgggacagcaactccacagcagcagtcgcacggccac
tcaactggcaggcccgtgaacaaacctcagtggcataaaccaaatgagtcagacccacgt
cttgctcactatccatctcaagggttttccacagaggaagatgaagatgaacaagtctct
gctgtctaa
DBGET
integrated database retrieval system