Geospiza fortis (medium ground-finch): 102042329
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Entry
102042329 CDS
T03755
Symbol
NPLOC4
Name
(RefSeq) NPL4 homolog, ubiquitin recognition factor
KO
K14015
nuclear protein localization protein 4
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102042329 (NPLOC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gfr03009
]
102042329 (NPLOC4)
Ribosome biogenesis [BR:
gfr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102042329 (NPLOC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
zf-RanBP
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
102042329
NCBI-ProteinID:
XP_014166539
LinkDB
All DBs
Position
Un
AA seq
622 aa
AA seq
DB search
MRPPEGLIPPLRSELWPEIIRVQSPEGVKRITATKRETVGTFLKKVAKEFGFRNNGFSVY
TNRNRTGEITAAQNKSLNLLKIKHGDMLFLYPSSPAGSSSETMDTSVSQNSRPGGAPQVV
EDEIDQYLIKQDGKIYRNRDQQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVKHMSFHA
YIRKLTGGADKGKFVALENISCKIKSGCEGHPPWPEGICTKCQPSAITLNRQKYRHVDNI
MFENHTIADRFLDFWRKTGNQHLGYLYGRYTEHKDIPLGIRAEVAAIYEPPQIGTQNSLE
ILEDPKAEVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSAEECITAGN
FQNQQPNICRLSPDGHFGSKFVTVVATGGPDNQVHFEGYQVSNQCMALVRDECLLPCRDA
PELGYAKESSSEQYVPDVFYKDIDKFGNEITQLARPLPVEYLIIDITTTFPKDPVYTFSI
SQNPFPIENRDVLGETQDFHSLATYLSQNTSSIFLDIISDFHLLLFLVTNEVMPLRDSIS
LLLEAVRTKNEELAQTWKKSEQWATIEQLCSTVGVPLPGLQEYGAMGGSSHAVAAAMWPC
QHCTFMNQPGTDHCEMCSLPRS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctcctgaaggtctaattccacctctgaggtcagagctttggccagagattatc
cgtgtgcagtcgccggagggagtgaagagaatcacggccaccaagagagaaacggtgggg
acgttcctcaaaaaggtggccaaggagtttggcttcaggaataatggattttctgtgtac
accaaccgcaacaggaccggcgagatcacggcagcgcagaacaaatccctcaacctgctc
aagatcaagcacggggatatgctgttcctgtatccctccagcccagctggctcctcctca
gagaccatggacacctctgtctcccaaaattcccggcctgggggggccccccaggtggtg
gaagatgagattgaccagtacctgatcaagcaggatgggaagatttaccggaaccgagac
cagcagctgtgtcgccacggccccttgggcaaatgtgtgcactgtgtcccactggagccc
ttcgatgaggattatttgaaccatctggagcctcctgtgaagcacatgtcattccatgcc
tacatcaggaagctgactggaggggcagacaaagggaagtttgtagccctggagaacatc
agctgtaagatcaagtcggggtgtgagggacaccctccctggcccgaggggatctgcacc
aagtgccagcccagtgccatcaccctcaacagacagaaatacaggcatgttgacaacatc
atgtttgagaaccacacaattgcagatcgcttcctagacttctggaggaagacagggaac
caacatctgggatatctgtacggccggtacacggagcacaaagacatcccgctgggaatc
cgggcggaggtggcagccatctatgaacccccccagattggcacccagaacagcctggag
atcctggaggatcccaaagccgaggttgtggatgagatcgcagcaaagctcggcctgaga
aaggttggctggatatttactgacctggtctcggaagacacacggaaaggaaccgttcga
tacagcaggaacaaggacacgtatttcctgagtgcagaggagtgcatcacagctggcaac
ttccagaaccagcagcccaacatctgtcgcctctctcccgatgggcactttggatccaag
tttgtcacagttgtggctacaggtggtcctgacaaccaggtgcactttgagggctaccag
gtgtccaaccagtgcatggccctggtgcgggacgagtgcctgctgccctgccgggacgcg
cccgagctgggctacgccaaggagtccagcagcgagcagtacgtgcctgatgtcttctac
aaggacatagacaagtttgggaacgagatcacccagctggctcgcccgctcccggtcgag
tacctcatcatagacattactacaactttccccaaggatccagtctacactttttctatt
tctcaaaacccattccctatcgagaaccgcgatgtgctgggagaaactcaggacttccac
agtttggccacatacttgtcccaaaatacttcctccattttcctagacatcatttccgat
ttccatctgctcctcttcctggtcacaaacgaggtcatgcctctgcgggacagcatcagc
ttgttgctggaagccgtgaggaccaaaaatgaggagcttgcacagacctggaaaaaatca
gagcagtgggcgaccatcgagcagctctgcagcacggtgggtgtccctctgccgggactg
caggagtacggcgccatggggggctcgtcgcacgccgtggccgcggccatgtggccctgc
cagcactgcaccttcatgaaccagccgggcacggaccactgcgagatgtgcagcctgccc
cgctcctag
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