Geospiza fortis (medium ground-finch): 102043622
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Entry
102043622 CDS
T03755
Symbol
USP16
Name
(RefSeq) ubiquitin specific peptidase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102043622 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102043622 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102043622 (USP16)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102043622 (USP16)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102043622 (USP16)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102043622 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
102043622
NCBI-ProteinID:
XP_005420581
UniProt:
A0A6I9HFZ5
LinkDB
All DBs
Position
Un
AA seq
822 aa
AA seq
DB search
MGKKRIKGKTAQSDESPDILKPVCKHIRKGLDQGHVRKALQNVEGHVCQDCKADSKTQEK
AEEEETDEGTSIWLCLKCGHRGCDRNSPDQHALKHYETPRSDPHCLVLNLDYWSVWCYIC
DNEVPYKTSTLLGQTVDFVRKQVVIDSSHAVEKQENKEVENKKVEKDSKNKQGKEVSLKE
ENSYSTANGEVTVKGLSNLGNTCFFNAVMQNLSQTPILRELLKEAKIPGTAIKIESPELC
MEPQLIKLDQPGPLTLAMHQFVTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHEL
LRYLLDGMRAEEIQQISIGMLKALSDSNKQNEEELKKKIKEYEKKKGIQSFVDRIFGGEL
TSTIMCEECRTVSLVHESFLDLSLPVLDVQKGKITKRENVKKNKEKESEDEEDKIDDHYL
KQKYEPRGTSKHLQKKMKKQAKKKAKSQRRQEKLQGKVLHLTDLCTTEQPEIDVKYNQES
DTEMSSETLDKKQEEESSHDCKDYCLTQKDLSIQGNSTEIQSRHENGGKPEQEWEENKSL
MDLSMDGLDSPMKFVNGLDNLSLKEEDDDNEDEEKLVTDFSKLHLGASDTSDTNTLDGLQ
PVPNKTCEVSTDDPEMAFCTLANREELNPEEDSVHHCLYQFTRNETLTETNKLLCDVCTQ
RHCGPKNNISEKKCVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLQKVNRHIKFPEVID
LAPFCTAKCKNVAEGNTKVLYSLYGVVEHSGTMRSGHYTAYVKMRAMNNHLSDLVLRGQS
QASEIEPVEGQWFHISDTHVQPVSVSKVLSSQAYLLFYERLL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaacgcatcaaaggcaaaactgcacagtctgatgagtctccagatatactg
aaacctgtgtgcaagcatattcgtaaaggactggaccaaggccatgtgagaaaggcactg
cagaatgtggaagggcatgtttgtcaggactgcaaggcagacagtaagacacaagagaag
gctgaggaggaggagactgatgaaggcacttcgatatggttatgcctaaaatgtggccat
aggggctgtgacagaaattctcctgaccagcatgctttaaagcattatgaaacaccaaga
tcagatccccactgtttggttctcaatttggactactggagtgtgtggtgctacatatgt
gataatgaagttccatataaaacttcaacccttttgggccagactgtggattttgttaga
aaacaagttgttattgactcatcacatgcagttgaaaaacaagagaacaaagaagttgaa
aataaaaaagtagaaaaagacagcaaaaataaacaaggaaaagaagtttcacttaaagaa
gaaaattcttattcaactgctaacggagaagtcactgtgaaaggacttagtaacttgggg
aatacatgtttctttaatgcagtgatgcagaatttatcacaaactccaatcctgagggag
ctgcttaaagaagctaaaatacctggcacagcgattaaaattgagtcacctgagctatgc
atggaacctcagctaataaaactagatcagccaggtcctttaacactagccatgcatcag
tttgtgacagaaatgcaagagacaaaaaaaggggtagtgactcctaaggaactttttgct
caggtttgtaaaaaagcaatacgattcaaaggttatcagcagcaagacagtcatgaactg
cttcgttacttacttgatggaatgagagcagaagaaatccagcaaataagcattggaatg
ctaaaggcgctgagtgactctaacaaacaaaatgaagaagaacttaaaaagaaaattaaa
gaatatgaaaagaaaaagggaatacaaagttttgtagatcgaatctttggtggagaatta
accagcacaattatgtgtgaggaatgcagaactgtgtccttggtccatgagtctttcctt
gatttgtcacttcctgtactagatgttcagaaagggaaaattacaaagagagaaaatgtt
aaaaaaaacaaagaaaaagaatctgaagatgaagaggataaaatcgatgaccattacctt
aagcagaaatatgagccccgtggtacaagtaagcaccttcagaaaaaaatgaagaaacag
gccaaaaaaaaagccaagagccaacgccggcaggaaaaacttcaaggaaaggtgcttcac
ttgacagatctctgcacaactgaacagccagagatagatgtcaagtacaaccaagaatca
gatactgaaatgagctccgaaactcttgataagaagcaagaggaggaatcatcacatgat
tgcaaagattactgcttaactcagaaagacttgagtatacaggggaatagtacagaaatt
cagagcaggcatgaaaatggaggaaagccagaacaagagtgggaagaaaacaagtcactc
atggatctctctatggacggcttagattctcctatgaagtttgtcaatggccttgacaac
ctgtctttgaaagaggaggatgatgacaatgaagatgaggaaaagcttgttacggacttc
tcaaaactccacttgggtgccagtgacacgagtgacacaaataccttggatggccttcag
cctgttcctaacaagacgtgcgaagtatctacagatgaccccgaaatggcattttgtact
ctggcgaacagggaagagctaaaccctgaggaagattcagtccatcattgtttgtatcaa
tttacccgtaatgaaacacttaccgagaccaataaactactgtgtgatgtgtgtacacaa
aggcattgtggaccaaagaacaacataagtgaaaagaagtgtgtttatactaatgccaaa
aagcagatgctcatctctctagctcctccaattttaacccttcacttaaagaggtttcag
caggctggatttaatctgcagaaggttaacaggcatatcaagttcccagaagtgatagac
ttggctcctttctgtacagctaaatgtaaaaatgtggctgaagggaatacaaaggtattg
tactctctctatggagttgtcgaacacagtggaacaatgaggtctgggcactacactgcc
tatgttaaaatgagagctatgaacaaccacctctctgatcttgttcttcgaggacaatct
caagcttcagaaattgagccagtcgaaggtcagtggttccacatcagcgatacccatgta
caacctgtctctgtgtccaaagtgctgagctcccaagcctatcttctgttctatgagagg
ctgctgtaa
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