Geospiza fortis (medium ground-finch): 102043751
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Entry
102043751 CDS
T03755
Symbol
USP47
Name
(RefSeq) ubiquitin specific peptidase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gfr01002
]
102043751 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102043751 (USP47)
Enzymes [BR:
gfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102043751 (USP47)
Peptidases and inhibitors [BR:
gfr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102043751 (USP47)
Ubiquitin system [BR:
gfr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102043751 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
102043751
NCBI-ProteinID:
XP_005426175
LinkDB
All DBs
Position
Un
AA seq
1363 aa
AA seq
DB search
MFWSCRQSIFAEMKKKFSQAECAAEEPRVLCIIQDTTNSRTVNERVTLNLPASTPLRRLF
ADVAAKVGYVNGSFDLVWGNGDTATDTTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQ
PHVMQEESGTAEDGAQERFIGPLPREGSIGCTHDYVSQSYSYSSVLSKSETGYVGLVNQA
MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPERSIPYQLQRLFVLLQTSKKRAIETT
DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLEC
GYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDAR
KGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESC
TDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMV
HSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASST
NAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCM
HPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLSCCRLVKYDEFHDYLERSYEG
EEDTPMGLLLGGVKSTYMFDLLLETRRPDQVFQCYKPGEVMVKVHVVDLKTESVAPPISV
RAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNVSSKTLKAEGFFRSNKVFI
ESSESLDRHVTYTDSQLWKLLDRHANTIRLYVSLPEQAPGSQLRRALYQKSAGAAGNLEE
PCERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQQQEGDNGDSSKSTEASDFENIESPL
NEIDSSASAENRELDNQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLC
NVDNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYM
YFKSEPYTAEEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEF
ESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTV
RQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEI
LDGVEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEF
AKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQR
NELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagttgcagacagagtatctttgctgaaatgaagaagaagttttcacaggca
gaatgtgctgctgaggagcccagggtgctgtgtataatccaggacaccacgaattccagg
acggtgaacgagcgcgtcaccctgaacctgcccgcctccaccccgctccggcggctcttt
gcagacgtggctgccaaagtgggctacgtgaacggctcctttgatctggtgtggggcaac
ggagacactgccactgacacgactccaatagatcagaacagtgacaaaaccattcttgat
gctggttttgagccagggaagaagaactttctgcatttgacagacaaggatggtgagcag
cctcacgtaatgcaggaggagtcaggtacagcagaggatggtgcacaggagagatttata
ggcccccttccaagagaaggctccattggatgtacccatgactatgtcagtcaaagctat
tcttattcttcagtcctgagcaaatcagagacaggttatgtggggctggtaaatcaagca
atgacttgctacttgaacagccttctgcaaacacttttcatgactcctgaatttagaaat
gcattgtataagtgggaatttgaggaatctgaagaggatcctgagaggagtatcccctac
cagctacaaagactgtttgttttactgcagaccagcaaaaaaagggcaattgaaacaaca
gatgttacgcggagttttggatgggacagtagtgaagcgtggcagcagcatgatgtgcag
gagctttgtagagtcatgtttgatgctttggagcagaaatggaagcaaacggagcaggct
gatcttataaatcaactgtaccaaggcaaactgaaggactatgtgaggtgcctagagtgt
ggctatgaaggctggagaatcgacacgtacctggatatccctctggtcatccggccctat
ggctccagccaggcgtttgctagcgtggaagaagcactgcatgctttcattcaacctgag
atccttgatggcccaaatcagtacttttgtgagcgatgtaagaagaaatgtgatgcaaga
aagggcctgaggttcttgcactttccgtacctgctgacattacagctgaagagatttgac
tttgattataccacaatgcacagaattaaactcaatgatcgcatgacttttccagaggag
ttggacatgagtgtctttattgatgtcgaagatgagaagtctcctcagactgagagttgc
actgatagtggagctgaaaatgaaggcagttgtcacagtgatcagatgagcaatgatttt
tctaatgatgatggagttgatgaaggaatctgccttgaaagcaatagtgcagcagagagg
atctctaaagctggcagtgaaaagagttctttgctgtatgagctcttttctgtcatggtt
cattctggaagtgctgctggtggccattattatgcctgtataaaatcttttagtgatgac
cagtggtacagctttaatgatcagcatgttagcaagataactcaggaagatattaagaaa
acatatggaggatcttctggaagcagaggatattattccagtgcttttgctagctccaca
aatgcttacatgctgatatacagactgaaagatccaacaagaaatgcaaagtttcttgag
gcacatgaatatccagagcacattaaacaattggtacagaaagagagagaattagaagaa
caagaaaaaaggcaacgtgaaattgaacgcaacacgtgcaagattaaattattctgcatg
catcctacaaagcaaataatgatggagaacaaattggaagttcataaggacagaacactg
aaggaagctgtggaaatagcttacaagctgatggatttagaagaggctgttcccttgagc
tgctgtcgccttgtcaaatacgatgagttccatgactacttggagcgctcgtatgaagga
gaagaggataccccaatgggtttgttacttggaggggtcaagtcaacctacatgtttgac
ttactgttggaaacaagaaggcctgaccaagttttccagtgctataaacctggtgaggtc
atggtaaaggttcacgtagtcgacctgaagactgaatctgttgctcctccaataagtgtg
cgagcttatttgaatcaaacagtgtcagagtttaaacagctaatttcaaaggccacacac
ctgcctgctgaaaccatgcgggtggtgctggagcgctgctacaatgacctgcggctgctg
aacgtctccagcaaaacactgaaagctgaaggcttttttagaagcaacaaggtgttcatt
gaaagctcagagtccttggatcgccatgtgacatacacagactctcagctgtggaagctt
ctggatcgccatgcaaacaccatcagactgtacgtttcattgccagaacaagctcctggg
tctcagctcagacgggcgctttatcagaagtctgctggggctgcaggcaacttggaggaa
ccttgtgaaagagtcaaaggacctgtaggtaatatgaaatccgtagaggcaattttggaa
gaaagcactgaaaaacttaaaagcttgtccctgcagcaacagcagcagcaggagggagat
aatggagacagcagcaaaagcacagaagccagtgattttgaaaacattgagtcaccttta
aatgaaatagactcttcagcatcagcagaaaacagagaacttgacaaccaaattcagatt
tctgatccagagaatctgcagtccgaggagcggtcggactcggatgtcaataatgacagg
agtacgagttcagtggacagtgacatcctcagctccagccacagcagtgacactctgtgc
aacgtggacaatgcccccctgcccctggctaacgggctggattctcacagcatcaccagc
agcaggcgatcaaaggccaatcagggcaagaaggaaacctgggacacggcagaagaggat
tctggaacagacagtgaatatgatgaaagtggcaagagcagaggagaagcacagtatatg
tactttaaatcagaaccctacactgcagaggagggttcaggagaaggacaaaaatggctg
atggtgcatgttgataaaagaattacactgtctgccttcaagcagcacttggagcctttt
gttggagttccatcttctcacttcaaagtctttagagtctatgccagcaatcaagagttt
gagagtgttcggctgaatgagaccctttcgtcattttctgatgacaataagataactatt
agacttggaagagcccttaagaagggtgaatacagagttaaagtctatcaactcttggta
aatgagcctgagccatgcaagtttcttctagatgcagtttttgctaaaggaatgactgtc
cgacagtccaaagaggagctgcttcctcagcttcgagaacaatgtggcctagacttgaca
attgacaggtttcgcctacgaaagaaaacctggaagaatccaggcactgtgtttctggat
tatcatatctatgaagaagatatcaatatttccagcaactgggaggtcttcttagaaata
cttgatggagtagaaaagatgaaatccatgtcacaacttgctgttttatcaagacgatgg
aggccgtcagagatgaaattagattctttccaggaagtagtactagaaagcagcagtgtt
gaagaattaaaagagaagctaagtgaaataagtggaatacccttagaaaacattgaattt
gcaaagggtagaggaacctttccctgtgacatttccatactagagattcatcaagacttg
gactggaatccaaaagtatctacattgaatgtctggcccctgtacatttgtgatgatggt
gcagtaatattttatagggataaaactgaagaattaatggaattaacagatgagcaaaga
aatgaactgatgaaaaaagaaagcagcagactccagaaaactggacaccgggtaacctac
tctccccgtaaagaaaaagcactaaaaatttatctggatggagcgccaaataaagatttg
actcaagactga
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integrated database retrieval system
