Geospiza fortis (medium ground-finch): 102045008
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Entry
102045008 CDS
T03755
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain 5
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102045008 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
102045008 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
gfr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102045008 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
Motif
Other DBs
NCBI-GeneID:
102045008
NCBI-ProteinID:
XP_005418193
UniProt:
A0A6I9HEE2
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All DBs
Position
Un
AA seq
232 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNVPLSISRLNDGGKAAQAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVSSIQKPDHFHVTKHGADGAQDAAEGPRRGGRENQGE
SKQQNGKNPPKRPPRKHIVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRI
LAQITGTDHMKEPENEAGKKTKEKVPIHVLSPKYTKLRDWHHEVSARVLNVQ
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggtcgggccggctccctggggtttcaggcttcaaggg
ggcaaggatttcaatgtgcctctgtctatctctcgacttaatgacggtggcaaggcagcc
caagcgcatgtggggatcggtgatgtggttctcaccattgatgggataagcacagatggc
atgactcatctagaagcacaaaacaagatcaaggcatgtacaggcaatttgaacatgact
ctgcaaagagtgtcttctatacaaaaacctgatcattttcatgtgacaaagcacggcgcc
gacggcgcccaggacgcagccgaggggccgcgacgaggaggcagagagaaccagggggag
agtaaacagcaaaatgggaaaaatccacccaaacgccccccacggaagcacatcgtggac
acctacacggagttctaccacacgcccacgcacagcgacgccagcaagaagcggctgatc
gaggacaccgaggactggcacccccgcaccggcaccacccagtcccgctccttccgcatc
ctcgcccagatcaccggcacggatcacatgaaagaaccagaaaatgaagctgggaagaag
actaaggaaaaggttcccatccacgtccttagccccaaatatacaaaattacgtgactgg
caccatgaagtctcagcacgtgttcttaatgtccagtga
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