Gallus gallus (chicken): 418764
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Entry
418764 CDS
T01006
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
418764 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gga03400
]
418764 (LIG4)
Enzymes [BR:
gga01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
418764 (LIG4)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
418764 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
SKA1
Motif
Other DBs
NCBI-GeneID:
418764
NCBI-ProteinID:
NP_001025987
CGNC:
12647
Ensembl:
ENSGALG00000016854
UniProt:
Q90YB1
LinkDB
All DBs
Position
1:141655421..141659430
Genome browser
AA seq
912 aa
AA seq
DB search
MASAPVLQPSPKRTVASHVPFADLCSTLERIQTCKSRPEKTKYFKDFLDSWRKFHSALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAVKLLNYRTP
TGSRGDAGDFAMIAYFVLKPRSPKRGRLTVEQVNELLDAIANNNAAKNKGLVKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPVDGSLTPFIHNVFKSDIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMINDQKLAHESLSKRYKILSNVFTPLTGRIHVVHKKSARTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAVAETPAPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYNRKDPP
CNILCGTEKPEMYIEPCNSVIVQIKAAEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMT
LDMLEHLRSRAEGKLASKHLYIDEYDEPQEKKRRTVPKVKKVIGIAEQFKAPDLSNVNKV
SSMFEDVEFCVMTGMGRYSKSELESRIAECGGSVVQNPGPDTYCVIVGAENVRVKNIIAS
NKYDVVKAEWLLQCFQSKMLVPWQPAFMIHMSPETREHFAREYDCYGDSYTADTDVAQLK
EVFSRVKDNKKMPLDLIAELEERYSWNSCKLCIFRGNTIYVDYYAIINKPSTKIHGTRLS
IRALELRFYGAKVVPLLEEGVSHVVIGEDHSRVKEMKALRRMFGKKFKIVSELWVTESVK
EGVPKNETQFLI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcacctgtgttacagccttctcctaaaagaacagtggcctcgcatgtgcct
tttgcagacctgtgttccaccctggagcgaatacagacgtgtaaatcccggccagagaaa
accaagtacttcaaggacttcttggattcctggaggaaattccacagtgctctccatcaa
aaagagaaagatgtcaccgattctttctatcctgctatgcggcttattcttccgcagctg
gaaagggaaaggatggcgtatggaattaaggaaaccatgcttgcaaagctttacattgag
cttcttaatttaccaaaagatggaaaggatgctgtgaagcttttaaattacagaacgccc
actggctcacgtggagatgctggagactttgcgatgatcgcatactttgtgttaaaaccc
cgaagccctaagcgaggcaggttgactgtagagcaggtcaatgaactgctggatgccatt
gcaaacaacaatgctgctaaaaacaagggactggtaaagaaaagccttcttcagttaatt
acccaaagcacagcactcgagcaaaagtggctcatccggatgattataaaggatctaaaa
cttggtgttagtcaacaaacgatattttcaatttttcatcctgatgctgctgaattacac
aatgtcacaacagatttggaaaaagtttgtaggcagctgcacgacccctctgtctcgctt
agtgatgtttctatcatgttattttctgcctttaaaccaatgctcgctgctattgctgat
gtacaacaaattgagaagcagatgaataaccaggtattctacatagaaactaaactggat
ggtgaacgtatgcagatgcacaaagatggtgatgtgtataaatatttttccagaaacgga
tttgactatactcagcagttcggtgcttcccctgttgatggctcattaacaccatttatt
cataatgtatttaaaagcgacatacaaaattgcattcttgatggtgaaatgatggcttac
aatcctgaaacacaaacctttatgcaaaaaggaaacaaatttgacatcaaaagaatggtg
gaggactctgatctgcagacctgcttctgtgtgtttgatgtattaatgataaatgatcag
aagttggctcatgaatccctgagcaaaagatacaagatcttaagtaatgtatttacccca
ttaacaggcaggatacacgttgtacataaaaaaagtgccaggacaagaaaagaagtaatt
gatgctttaaatgaagcaatagataacagagaggaagggattatggtaaaagacccaatg
tccacctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatatgtc
aatgggctgatggatgagctagatcttcttattgttggtggctactggggaaaaggctca
cgtggtggaatgatgtctcactttctgtgtgctgttgcagagactccagctccaaatgaa
aaacctactgttttccactctatttgtcgtgttggctctggctacactatgaaggaatta
tatgatctgggtttgaaactagctaaacactggaagccttacaataggaaggaccctcct
tgtaacattctgtgtggcactgaaaaacctgaaatgtacattgagccttgcaactctgtc
atagttcagatcaaggcagctgagattgttaacagtgatatgtacaaaactgactgtact
ttgagattcccccgaattgaaaaaataagagaggacaaagaatggtatgaatgcatgact
ttggacatgctagaacatcttagaagcagagcagaagggaagctggcatccaagcaccta
tatattgatgaatatgatgagccacaagagaagaaaaggagaactgtaccaaaggtgaag
aaagtaattggaatagctgagcagtttaaagctcctgatctttctaatgtcaacaaagtt
tccagcatgtttgaggatgtagaattttgtgttatgacaggaatgggaaggtactccaag
tctgaactggaaagcagaatagctgaatgtggtggcagtgtggtacagaaccctggacct
gacacttactgtgtcattgtaggagctgagaatgtcagagttaaaaacatcattgcttcc
aacaaatatgatgtggtaaaagcggagtggctgcttcagtgttttcagtccaaaatgctg
gtaccttggcagccagcctttatgattcacatgtctcctgaaacaagagaacattttgct
cgtgagtatgactgctatggagacagctacacagcagatacagatgttgcacaactcaag
gaagtgttctcaagagtgaaggataataagaagatgcctttggatttgattgctgagtta
gaagaacggtattcatggaacagctgtaaattgtgtatattcaggggaaacactatttat
gtggactattatgctattattaacaaacccagtaccaaaatccatggcacaagactatca
attagagctttagagctccgtttctacggtgcaaaagtagttcctcttcttgaggaaggt
gtgtcccatgttgttataggagaagatcattctcgggtaaaagagatgaaagctctcagg
agaatgtttgggaaaaaatttaaaattgtatctgagctatgggtaacagagtcagttaag
gaaggagtcccaaagaatgaaactcagttcttaatttaa
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