Gallus gallus (chicken): 419127
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Entry
419127 CDS
T01006
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
419127 (CHD6)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
419127 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
419127
NCBI-ProteinID:
XP_024998140
CGNC:
14599
LinkDB
All DBs
Position
20:complement(680594..753206)
Genome browser
AA seq
2737 aa
AA seq
DB search
MIMKIQKKDKQPPSLKVLSHSPMSDASDTWECKAQGPLASSEEQQSPRATATEAGGQCLC
PEEQPDGAPLRRPGAQNGMQDTGAVGTGVKKKRKKKDLGEQEGGEKAAVEVKPKRRREPK
EPKEPKKAKEPKKQKEPKQREVTKKARKPREPKAPKEPKDRKSSSEPGPRTRPKKSSKEQ
GPTPVEKKKKGKRKNEIPVDSLDLDQDLLSPSAQSPEESAESADSQKRRSGRQVKRRKYN
EDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKETH
PGGLTFEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDE
DLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPVKIKEFE
ALQIPPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNC
ILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGS
QISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHR
LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDL
KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL
SKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAA
GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI
DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRS
RRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCV
KHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNA
DWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGDAADKAFEGTPARELD
VLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLS
AEQGISDGAQDTAERGTMEKEESNGEKLEGLPKQEDIVAAGAGEAGEKRDEPSAAQDGSD
SDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEMLVPGNHGYWLQDEVFRRASEMDS
VNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKTFDWTQFRAISRLEKKTDESLEKYFYS
FVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHER
LKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
GIPGSETLCCLYQTNSKLYSSPLYSQVDRTCESLENETESQIKLESTDSTMSQAGGSPPD
TSCETFMSKVRDIISSNYDESSLPDSLMCMMYDEKACNSEQSSLARDSPSCTDVGSSIAK
LSEGKLEGDEDPSSCDAEAMREASFLEGLQVGCDQMDCQNEEAEPSPSTPESDPSRSVPA
ELCEAMQQKRDLGSPAPVLPEHRAMEGVISMGLYGPSLHNYDVKVPPEQRFINLLQEKGM
EAKAGPSQSHSEEDEEEEDDDNSEVAADVTEGLSGPKATASCDELGGEEQSPGLPAHEDV
CPEDVNSERGSLGLGTLKAPMEPGPEGRENHSLHEENTLQHLPGQSQSRAFSLPAPPLGA
AGAQPLHAGVEAWGQEVEGQAGCREALHPEPPGVKQEECEIRDEEEKTGSSQSQDGPDKY
LEEESKSSTSVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAIL
KGKWPSSSQQFETQSLLAAPAVASNAGSRNSFAESETPDPSFNNGVLISQVQKEGFLNPA
FAKDERKHRRLYEFELERDAKQRSLEQLAAAHVHPPIVLNGWRDAAVDLSRASDGSPGNS
SPFPLNTNMPKLGTVNTLQGSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGR
RKNVEGMDLIFLKERPLPTRLQDVQDDQLQPPQNSPLPDGPAAATSTPQPVPAAGVQAEK
AVPNKSLLDWLRQQSDYTLDVPGFGTNFSDKPKQRRQRCKDPSKLDISALTGEERVPVVH
KGTGRRLGGATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPESKFNRVLTEPVLRD
AGPRRRGRRPRSELIKGPGVVADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLV
GFPAGFAAVPAGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNPPMATTCTATAPTSLTS
TTKSGTSNAEKATEDKQSSQDAKKETLSEDKPGPSSFSNQTESAITTSSPVAFNPFLIPG
MSPGLIYPSMFLSPGIGMALPGMQQARHAEAASLESQKRKRKKAKGDAANPEPETVSLPE
KEAANGQNCTEQTPPLPAEQEQDVPAEEEVKEVSDTN
NT seq
8214 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaaaaaagacaagcagccacccagcttaaaagtgctgagccac
tccccaatgtcggatgcctcggacacctgggagtgcaaggcgcagggccccttggctagc
agcgaggagcagcagtccccccgggcgacggccacagaggcaggcgggcagtgcctgtgc
cccgaggagcagcctgacggggctccgctgcggcggccaggtgcccagaacgggatgcag
gacactggggctgtgggcacgggggtgaagaagaaacggaagaaaaaggatttgggagag
caggaaggaggagaaaaagcagctgtggaggtgaaaccaaagaggagaagagagcctaaa
gaaccaaaagagcctaaaaaggccaaggagcccaagaagcagaaggagcccaagcagagg
gaggtgaccaagaaggcccggaaacctcgggagcccaaagctcccaaggagcctaaagac
aggaaaagcagctctgagcctggccccagaacaaggcccaagaagagcagcaaggagcag
gggcccacccctgtagagaagaagaagaaagggaagaggaaaaatgagatcccagtggac
agcttggatttggatcaggatcttctgagcccatcagcacagagccctgaggagtccgcg
gagtcggctgacagccagaaacgccgctctggccggcaggtgaagcggaggaagtacaat
gaggacctggatttcaaggtggtggatgatgatggcgagacgatagctgtgctgggagct
gggcgaacctccgcgctctccgcctccactctggcatggcaggctgaggagcctcctgag
gatgatgccaatatcatcgagaagatccttgcctcaaggatggtgcagaaggagactcat
cctggaggcctgacgttcgagatggaggagttctacgtcaagtacaggaacttctcgtac
ttgcactgtaagtgggcaactctggaggagctggagaaggacccccgaatatcccagaag
ataaagcgcttccgaaacaagcaggctcagatgaagcatatttttacagagcctgatgag
gatttgtttaacccagactatgtggaggtagatcgaattctggaggtggctcacacgaag
gaccctgacactggagaggaggtgactcactacctggtgaagtggtgctccctgccctat
gaggagagcacctgggagctggaggaggatgttgatccagtgaagattaaagagtttgaa
gccctccaaatccctccagaaatcaagcacatggtaacgtacccagaggagcgcccagca
tctgagtcctggcagaaactggagaagtcccgagagtataagaatagcaaccagctgcgg
gaatatcagctggagggaatgaactggctgctctttaactggtataacaggaagaactgc
atcctggctgatgagatggggctggggaagacaatccagtcaatcaccttcctctcagaa
atcttcctgatgggcatccatggccccttcctcatcatcgctcccctttccaccatcact
aactgggagagggagtttcgcacctggacagagatgaatgccatcgtgtaccacggcagc
cagatcagccggcagatgatccaacagtatgagatggtgtacagggacacacagggcaat
cctctccctgggatcttcaagttccaggtggttatcaccacctttgagatgatccttgct
gactgcccagagctgaagaagatccagtggcgctgcgtggtcattgatgaggcgcatcgc
ttgaagaacaggaactgcaagctgctggaggggctgaaacttatggccctggagcacaag
gtgctgctgacaggcacccccctgcagaactcagtggaggagctcttcagcctcttgaat
ttcctggagccacaacagtttccctcagagacagccttcctggaggagtttggggacctg
aagacagaagagcaggtgaagaagctgcagtccatcctgaagcccatgatgctgcgacgg
ctgaaagatgatgtagagaagaatctggcacccaagcaagagaccattattgaggtggaa
ctgaccaacatccagaagaaatactaccgggccattttggagaagaacttctcctttctg
tccaagggtgccaatcagcacaatatgcccaatctcatcaacaccatgatggagctgcgg
aagtgctgcaatcacccatatctcatcaatggggcagaggagaagatcctggaagacttc
cgtaaaacacacagcccggaggcaccagacttccagctgcaggcgatgatccaggcagct
ggaaaactggtgctcattgacaagctgcttcccaagctgattgctggtgggcacaaggtg
ctcatcttctcccagatggtgcgctgccttgacatcctggaagactatctcattcagagg
cggtacacctatgagcgaatcgatggacgggtgcgtggcaacctgcgccaagctgccatc
gaccgcttctgcaagccggactcggatcgctttgtctttctgctgtgcacgcgggcgggt
ggactgggcatcaaccttactgctgccgacacctgcatcatctttgattcagattggaac
ccacagaatgacctccaggctcaagctcgctgccaccggatcgggcagagcaaggcagtg
aaggtgtatcgcctcatcaccaggaactcctacgagcgggagatgtttgacaaggccagc
ctgaaactgggcctggataaggcagtgctgcaggacatcaaccgcaagggcggcaccaac
ggggtccagcagctctcaaagatggaggtggaggacctgctgcggaaaggtgcctatggt
gctctcatggatgaggaggatgaaggatccaagttctgcgaggaggacattgaccagatc
ctccagcgcaggacgcagaccatcacgatccagtccgaggggaagggttccacctttgcc
aaggccagctttgtagcatcaggcaacagaactgacatctccttagatgaccccaacttc
tggcaaaagtgggccaaaatagcagagcttgataccgacgccaagaatgaaaaggagagc
ttggtcattgacaggccccgtgtgcggaagcagaccaaacactacaactccttcgaggag
gatgagctgatggagttctctgagctggacagcgactcggatgagcgacccacacgctca
cggcgcttcaatgagaagacgcggcggtacctgcgggctgagtgcttccgtgtggagaag
aacctgctcatattcggctggggacgatggaaagatatcctgacccatgggcgcttcaag
tggcacctgaacgagaaggacatggagatgatttgtcgagcactgctggtttattgcgtc
aagcactacaaaggggatgagaagataaagagttttatctgggatctcatcacaccaacg
aaggatggccagaaccaggctctgcagaatcactcaggtagtttgtcagcaccagtgccc
agaggcaggaaggggaagaagacaaagaaccaaatgctgcttccagagataaagaacgca
gactggcttgctacatgcaaccccgaggtggtcctgcatgacgacagctacaagaagcac
ctcaaacagcactgcaacaaggttctgctgcgagtgcggatgctgtactacctgaaggct
gaggtgctcggggacgccgctgacaaagccttcgagggcacccctgccagagagctggat
gtgctgctgccagacatcgactacgtggagatcccagtggactggtggaatgctgaagct
gataaatctttgctcatcggtgtcttcaagcacggttatgagaggtacaatgccatgcga
gcagacccggcgctgtgcttcctggagaaggtgggcatgcctgatgagaagctgctttct
gcagagcagggcatcagcgacggggctcaggacactgctgaaaggggcaccatggaaaag
gaagagagcaatggagaaaagctggaggggctgccaaagcaggaggacattgtggctgct
ggggcaggcgaagctggcgagaagcgggatgagccatcggcagcccaggatggctccgac
tcagacagatcctgctggcctgtctcgtctgccctcacagccaggctgcggcggctcgtc
actgtctaccagcgctgcaaccgcaaagagttgcctgcgcgcggagagatgctggtgccc
ggtaaccatggatactggctgcaagatgaggtgttccggagggcctctgagatggactcg
gtgaacaaagagatgcagaaaaggtggacaaggagggagcaggcagatttttaccgcact
gtctcttccttcggggtcatctatgaccaggagaaaaagacctttgactggacccagttc
cgagccatctctcgtttggagaagaaaacagatgagagcttagagaagtacttctacagc
tttgtggccatgtgcaagaatgtctgtggtctcccactgtggaaagaagatggtcccccg
gaccccgacatctacgtggagcccatcacggaggagcgcgctgccagaacgctgtaccgc
attgagctgctgcggaaggtgcgtgagcaggtgctgaagtgtccgcagctccacgagcgg
ctcaagctgtgccggcccagcctctacctgcctgtgtggtgggagtgtggcaaacacgac
cgggacctgctgataggcaccgccaagcacggcctgaatcgcacggactactacatcatg
aatgacccgcagctgtcttttttagatgcatacaggaactatgcccagcataaaagaaca
gggatcccgggctcagaaactctgtgctgcctgtaccagactaactccaaactctacagt
tcccctctgtatagtcaggtggatcggacttgcgaatccctggagaatgagaccgagagt
cagatcaagctggaaagcactgacagcaccatgtcccaggctgggggcagcccgccggat
acaagctgtgaaacattcatgtctaaagttcgggacatcatttccagtaactatgatgag
agctcgctgccagactcgctgatgtgcatgatgtacgacgagaaggcctgcaacagtgag
cagagctccctcgcccgagacagcccgagctgcacagatgttggaagcagcattgctaaa
ctgtccgagggcaagctagagggggacgaggatccatccagctgtgatgcagaggccatg
agagaggcttccttcctggagggtttgcaggtgggctgtgaccaaatggactgtcagaat
gaagaagctgagccttcaccttctactcccgaaagtgacccttcacggagcgtcccagca
gagctctgtgaggccatgcagcagaagagagaccttggcagccctgcgccagtgctgcct
gagcaccgtgccatggaaggggtcataagcatggggctgtacggtcccagccttcacaac
tatgacgtgaaggttcctcctgagcagaggttcattaatctgctgcaggagaaaggaatg
gaggcaaaagcaggtccaagtcagagccacagtgaggaagatgaggaggaagaagacgat
gataactcagaggtggcagcagatgtcacagaaggcttgagtggtccgaaggccacggcc
agttgtgacgaactggggggtgaggagcagagccctggcctccccgcacatgaggacgtt
tgtcctgaagatgtgaacagtgagagagggtccctggggctggggacgctcaaagcaccc
atggaacctgggccggagggcagggagaaccacagcctgcatgaggaaaacaccctgcag
cacttgccaggccagtctcagagccgggctttcagcctgcctgcccctccattgggggcc
gcaggggcacagcccctccatgccggggtagaagcctggggccaagaggtcgaggggcag
gcaggctgcagggaggccttgcaccctgagcccccgggggtgaagcaagaggaatgtgag
atcagagatgaggaggagaaaactggcagcagccagagtcaagatggcccagataaatat
ttggaagaagagagcaaaagttcaacttctgtcctgcctggggagattgatgacctgcag
gatgcccgggcaccaaccatcgcccagctgctgcaggaaaagacgctttactccttctct
gagtggcctaaggatcgtgtgatcatcaaccgcattgacaacatctgccacgccatcctg
aagggcaagtggccgtcctccagccagcagttcgagacccagagcctgctggcagcccca
gccgtagccagcaatgccggtagcaggaacagctttgctgagtcagaaacccccgatccc
agcttcaacaatggagtgttaatctcacaggtacaaaaggaaggcttcctgaaccctgcc
tttgcaaaagatgagcggaagcacaggcggctatatgaatttgagctggagagagacgcc
aagcagaggagcttggagcagttggcagcagcccatgttcatcctcccattgtgctgaat
ggctggcgcgacgcagctgtggacctgtccagagcctctgatggatccccaggaaactcc
tctcctttccctctgaacacaaacatgcccaagctggggactgtcaacaccctccagggc
tccctgggcatggacttgtctggcattctgcaggcggggttaatccatcctgtcacagga
caaattgtaaacggcagcctccgaagagacgatgctgccatgaggaggagacggggcagg
agaaaaaatgtagaagggatggacctcatcttcctgaaggagaggcctcttccaaccagg
ctgcaggatgttcaggatgatcagctgcagccgccccagaacagccccctcccagatggg
ccggcagctgctacctcaactccacagccagtcccagctgcaggtgtccaggccgagaag
gctgtccccaacaagagtctcctcgactggctccgtcagcagtccgactacacgctcgac
gttcccggctttggcacaaatttttcagacaagcccaagcagaggaggcagcgctgcaag
gaccccagcaaattggacattagtgcactcacgggcgaggagcgggtgccggtggtacat
aagggtaccggacggaggttagggggagccacggcaccagcattgaaggaattgccaagg
tggcttgatgcaaacttggagtatgctgttgcagctgactgggctgacattgttaagctt
tcaggctacttaccagagagcaaattcaaccgtgtgctgactgagccggtgctgcgtgac
gcggggccgcgccgcagggggaggcggcccagaagtgagctcatcaaaggccccggcgtc
gtagcagattcgtcttctggaatgggaccattgttcatgaacggactgattgccggaatg
gatctagtgggacttcagaacatgagaaacatgcaagggatccccctgaccgggctggtc
ggcttccctgcgggctttgcggccgtgcccgctggcgaggacgtgaagagcaccctgagc
atgttgcccatgatgctgccaggcatggccaccgtaccgcagatgttcggcgtcggaggg
cttctcaacccgcccatggcaacgacttgtaccgcgactgctccgacttccttaacaagc
acaacaaaaagtggtacatcgaacgcagagaaagctactgaggataaacagagcagccag
gatgcgaaaaaagaaactctttctgaagataagcccggccctagttcgttttctaatcag
acagaatctgcaataactaccagtagtcctgtagcttttaacccgtttcttatcccaggg
atgtcacctggactgatctatccgtcgatgtttctctcccctggcattggcatggcgctg
ccgggcatgcagcaggccaggcacgcagaggcagccagcctggagagccagaagcggaag
agaaagaaagcgaaaggggacgcagcgaacccggaaccagaaactgtctcgctgcccgaa
aaggaagctgcaaacggtcagaactgtacagagcaaacaccgcctttgccagcagagcaa
gagcaggacgtaccagcagaggaggaggtcaaagaagttagtgataccaattag
DBGET
integrated database retrieval system
